Gene Gmet_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1858 
Symbol 
ID3741535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2070642 
End bp2071127 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content53% 
IMG OID637779142 
ProductN-terminal methylation 
Protein accessionYP_384812 
Protein GI78223065 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.450176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTATA TACGAAACCG TAAGGGATTG AGCTTTATTG AGCTCATAAT GACTGTAACC 
ATTCTCGGTA TACTGGCGAC AGTGATAGTT CCCTTTACCC AGATGACCGT CAAGCGGAAC
AAGGAGCTTG AGCTGCGCAG ATCCCTCAGG GAGATCCGCA CTGCCATAGA CGAGTACAAA
AAAGCCTATG ACGACGCCCA CAAGGGGAAA CAGATCCTGA ACGAGACAGG ATATCCCGAA
ACCCTGGAGG TTCTGGTTAC GGGTACCGAT TTCGGCGGCG AAGCGAAGTC GACCAAGAAA
AAGTTCCTCC GGAGGATTCC CGTAGATCCC TTCAACCGTC CCGCGTCAGG GGAAAAGCCC
GAATGGGGTC TGCGTTCCTA CAAGGACGAG CCCGATAGCA CGACGTGGGA CAATTCGGAC
GTGTATGACG TCTATTCCCT GAGCGAGGGT ACGGCCATCG ACGGGACAAA ATACAAGGAC
TGGTAA
 
Protein sequence
MRYIRNRKGL SFIELIMTVT ILGILATVIV PFTQMTVKRN KELELRRSLR EIRTAIDEYK 
KAYDDAHKGK QILNETGYPE TLEVLVTGTD FGGEAKSTKK KFLRRIPVDP FNRPASGEKP
EWGLRSYKDE PDSTTWDNSD VYDVYSLSEG TAIDGTKYKD W