| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1835 |
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| Symbol | |
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| ID | 3741512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2049288 |
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| End bp | 2050610 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637779119 |
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| Product | 23S rRNA methyltransferase/RumA |
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| Protein accession | YP_384789 |
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| Protein GI | 78223042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0118794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAG CCGTTGTCCG GATTGAGTCC CTGGCTTTCG GTGGAGCCGG CTTCGGCCGT
GTCGAGGGGA AAGCCTGTTT CGTACCGTTC ACCGCGCCGG ATGACCTTGC CCGCATACGG
CTGAGCCTGG TAAAGAACTC CTATCTTGAA GGGGAAATCG TCGAGCTCCT TGAAGCATCA
CCACGCAGAG TGGTTCCCCT GTGTCCGGTT TTTGGCATCT GTGGCGGATG CACATGGCAG
CATCTTTCCT ACGATGACCA GCTTGAGGCG AAGGAACGAA TTGTTGGCGA CACCCTCTGG
CGTTTCGGTC GGATTGAGTC GGAGCGGGTC GCCAGGGCTG TTCCCTCCGA CTCCCCCTAC
GGCTACCGCT CACGGGTCCA GTTCAAGGTG CGCTGGACCG CCGGAAAGCT CCAGATGGGC
TTCTACCGCC GCGGATCCCA CTATGTCGTG GATATCCCCG AAGGGTGCGC TATCTGCAAT
TCGGCCCTCA ATCAGGTATT GGCGGAGATT CGCCCTGTCA TCAGTTGTTT CGCTGAGCCC
GACCGTATTC CCCAAGTGGA CGTGGCCGTG GGAGATGACG GCGTCACCTT GGCCGTAGTG
CATTATATCG GCGACAATCG AGATCGTGCA CGGGCGCATT TTACCGCCTG CCGTAGTGAT
CTCCCAGCGG TGGGTGGACT CCATCTTCAG TGCGGCCGAA AGGAAAGCAT TGAACCCCTC
TGGGGGGATG ATGCTCTCAC CTACCGCTTC CCTGGCGACT TCTTGCCGAA ACTTCCCTCC
ATGACCCTGA GCTTCAGCCG AGGCGGCTTC TCTCAGGTCA ATTACCGTCA GAACCGGGAA
CTGCTGCGCG CGGTTCATCG AATGGCGGAT CTGACCGGGG AAGAACGGTT GCTGGACCTG
TTCTGTGGCA ACGGCAACTT TGCCATTCCT CTGTCCCGAT ATGCCATGGC AGTTGTGGGG
ATCGAAGACT ATGGCCCCTC ACTGGAAGAT GCAAGGCGCA ATGCAGCGGC CAACGGTGCA
GGAAAGATCG AGTTCATCCG TTCCGATGCC GCCGCTGGAG TGCGTCAGCT TGTCTCCCGT
GAGAAACACT ATTCGGTGGT TGTTCTCGAC CCTCCGCGGA CCGGCGCCAA AGAGGCGGTG
ACAGAGGTGA CCTCCCTCAG GCCGGAGCGG GTTGTCTATG TTTCCTGCGA CCCTGCCACC
CTGGGAAGGG ATCTCGGGCT CTTCCGCAAG TCCGGTTACG ATGTCCGCGA ATGCCTCCCC
GTCGACATGT TCCCCCAAAC GTTCCATATT GAAAGTGTCA CCTTGCTGAG TAGAGCCGAC
TGA
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| Protein sequence | MTEAVVRIES LAFGGAGFGR VEGKACFVPF TAPDDLARIR LSLVKNSYLE GEIVELLEAS
PRRVVPLCPV FGICGGCTWQ HLSYDDQLEA KERIVGDTLW RFGRIESERV ARAVPSDSPY
GYRSRVQFKV RWTAGKLQMG FYRRGSHYVV DIPEGCAICN SALNQVLAEI RPVISCFAEP
DRIPQVDVAV GDDGVTLAVV HYIGDNRDRA RAHFTACRSD LPAVGGLHLQ CGRKESIEPL
WGDDALTYRF PGDFLPKLPS MTLSFSRGGF SQVNYRQNRE LLRAVHRMAD LTGEERLLDL
FCGNGNFAIP LSRYAMAVVG IEDYGPSLED ARRNAAANGA GKIEFIRSDA AAGVRQLVSR
EKHYSVVVLD PPRTGAKEAV TEVTSLRPER VVYVSCDPAT LGRDLGLFRK SGYDVRECLP
VDMFPQTFHI ESVTLLSRAD
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