| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1728 |
|---|
| Symbol | |
|---|
| ID | 3741404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1943040 |
|---|
| End bp | 1946018 |
|---|
| Gene Length | 2979 bp |
|---|
| Protein Length | 992 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637779013 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase |
|---|
| Protein accession | YP_384684 |
|---|
| Protein GI | 78222937 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.398358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG CATCGGCAGC CTCAAAACCC CAGAGTGCGG AGCGGGCAGA AAACCGCCTC
TGGCTTCGGG AACAACTGAA CCCCTACTTC TTCATTGCCA TGAAGGACGA ACCGGAGGCC
CTGGGACTAT TGACCCGAGA GCTCGGGACG CTGCGGCACA ACCGGCGGCT TATCCTGGCC
GACCGGGAAA AGGCCCTTAT CCTGGCGATT GTCAACCAGC CCGGCACTCT CTACGATACC
CTGCGCCACA TCCATGAGCG GGAGATATCC TACACCATGA TCGCCCACTC GGACGATCCG
ATCCCGGGTT TGGACCAGAA CCTGGAGATC CAGCGCTTCG AGTTTGACCG CAGGAGCAAC
GAGGAGATCC TCGCCGGCAA GGACGGGGAG ACACCGATCG GCATCAGGCG AACGGTGGCT
GCGGCGTTGC GCAAGTACTA CCCCGACTTC GACATGGCCG ATTTCGACCG TCTGCTCCGC
ATCCTCTGGC TTAACAATCA GAACTACGTC CGAATCTCGC CCCCGCGCCG GGTGGCCCAG
GCGCTTCGCC TCTACCAGGA GGGAAACCGT CGCGGCGGCC TCTACCTGGA CGTGGAAGAG
ATGGAGAGTG GCGCCAGCCA TGAATCGCGG GTCTTCTTCG CGGTGGGGAA CCCGCCCCAG
AAAGACTTCC TCCTCCAGAT AATGGAGGTC TTCAACCGCC TCGAACTCGG CGTGAACCGT
GCCTACTGCC TCACCATCAG CAACGGCGTT CACCCTTACT TCCTCGGCAC TTTTTACGTG
CGACGCCGCG ACGGCGGCGT GCTCGCCAGG GGATCGGAGG CCTTCAGCCG GCTCGAAGGG
GAACTCTCCA ACACCCAGCT CCTGGCAACC CGCTCCCACG CCTATCGGGA GTTCGTCACC
ACCGGCCTCA TGAGCGGCGA GGACGCTACC CTTACCAACG CCTTCATTGC CTTCTGCCAC
TCGAACCTGG CCCACAACCA GCCCGACCGT TTCGGTCTCG ACGATGTGCG CGACGCGTTC
CTGGCGCACC CGGAAATCGC GCTCCAGTTG GCCGGGCTCT TCCGCTCCCG CTTCGATCCG
GCCGTGGAGG AGCGGGACGC CGACCACGAG AAAATCCTCG CCGATACCCG GCGCGAGGTG
ACGGAATACA ACTCCGGCCA CCGCTACCTG GACGAGGTGC GGCGAACCAT CTTCCGTTGC
TGCCTTGCCT TCATAACCCA CACCCTGAAG ACAAACTTTT TCGTACGGGA GAAGCAGGCC
TTGGCTTTCC GGCTCGACCC GGCCTACCTT GCCGAGCTTG GTACCGACTT CACCGCCGAT
CTGCCGCCGG CCATGCCGTT CCGGATCACC TTCTTCTACA GCCGCTACGG CTTCGGTTAC
CACATCGGCT TCTCCGACAT CGCCCGGGGC GGCTGGCGCA CCGTCATCTG CCGCACCGCC
GACGATCTCG TCACCAACGC CAACACCCTT TTCCGCGAGA ATTTTGTCCT GGCCCACACC
CAGCACCTGA AGAACAAGGA CATCTACGAG GGGGGATCGA AACTGGTGAC GCTCCTGGAC
GCCTCGGACC TGATGCGGGA GCGTGAACGG GAACGGGAGG TGGAGACCTG GCGGCTCTAC
AAGCTCCAGT TCGGCATCAC CGGCGCCTTC CTCGACATCT TCACCACCGA AAACGGGGTG
GCGAAACATC CGGCCGTGGT GGACTACTAC CGGGAGGACG AGCCGATCGA ACTGGGACCC
GACGAGAACA TGCACGACAC CATGATCGAG ACCATCGCCG CCATGTCGAA GCGGCGGGGC
TACATGCTCG GCATCGGTAT CATGTCGAGC AAGAAGGTGG GGATCAACCA CAAGGAATAC
GGGGTCACCT CCACGGGGGT CGTGAAGTTC GCCGAGATTA CCATGAAGGA GCTGGGGATC
GACATCCGCA AAGACCCGTT CACCCTCAAG CTCACCGGTG GACCCAACGG CGACGTGGCC
GGCAATGCCC TGCGGATTCT TCTGAAGCGC TCGCCGAAGG TGAACATCGC CCTCATCCTT
GACGGCACCG CAGCGGTCTG CGATCCGGCA GGCGCCGATC ACGGGGAGTT GGGGCGCATC
CTCCTGAAGC AGGATCTGGA CGGCTTCGAC CCGGCGGCGC TTCATTCCGG CGGGTTCATG
CTTTTCCGGA CCGGAAGCCG CCGCGAAGGG CTGAGGGAAC TTTTTCGCCG GGTGACGAAA
ACCGACGGGG GGGTGGTTGA GGAGTGGATC TCCCTGGATG AGTTCTCCAA GGAGTACGGG
GATCTGGTCT TCACGGTCCC GGCTGATCTT TTCATCCCTG CCGGCGGCCG TCCCGAGACC
ATTGACAAGG ACAACTGGGA GCGCTTCTTA CTCCCCGATG GAACACCTTC AGCCCGGGCC
ATCGTGGAGG GGGCCAACTC CTTCATCACC CCGGCGGCCC GGATCGAGCT CCAGAAGAAG
GGGATCATCG TCATGCGCGA CGCCTCGGCC AACAAGTGCG GCGTCATCTC CTCCTCCTAC
GAAATCATCG CCAACCTGCT CCTCTCGGAG AAGGAGTTTC TGGAGCACAA GGAGCGCTAC
GTAGCCGATG TGCTCCAGAT CCTTGAAAAG CGTGCCGGCG ACGAGGCGCG GCTCATCCTC
AGGCGCCGCC GCGAGCAGCC GGGGCTTCTC TGCACAGAGA TATCCGATTC ACTCAGCACC
GAGATCAATG CCAACTACGC GCGTCTCTTC AGATTCTTCC AGGGGCGCCC CGGGCTCGCG
CTCCAGCCCC TCTTCCGCCG TGCGGTACTG ACGCACCTGC CGAGGATCAT CGCCGATGAG
CCCCGGTTCC GCCGGCGCCT TGCCCGGCTT CCCCAGAAGT ACCTCTCGGC CATTCTCGCC
GCCGAGATCG GATCGTCAAT GGTCTACAAG GGTGACCGGG AGGCGGAGTT CGAGGATATG
ATACGGCTCC ACCTGACGCG GAATTTCCCG TCAGCATAA
|
|---|
| Protein sequence | MTAASAASKP QSAERAENRL WLREQLNPYF FIAMKDEPEA LGLLTRELGT LRHNRRLILA
DREKALILAI VNQPGTLYDT LRHIHEREIS YTMIAHSDDP IPGLDQNLEI QRFEFDRRSN
EEILAGKDGE TPIGIRRTVA AALRKYYPDF DMADFDRLLR ILWLNNQNYV RISPPRRVAQ
ALRLYQEGNR RGGLYLDVEE MESGASHESR VFFAVGNPPQ KDFLLQIMEV FNRLELGVNR
AYCLTISNGV HPYFLGTFYV RRRDGGVLAR GSEAFSRLEG ELSNTQLLAT RSHAYREFVT
TGLMSGEDAT LTNAFIAFCH SNLAHNQPDR FGLDDVRDAF LAHPEIALQL AGLFRSRFDP
AVEERDADHE KILADTRREV TEYNSGHRYL DEVRRTIFRC CLAFITHTLK TNFFVREKQA
LAFRLDPAYL AELGTDFTAD LPPAMPFRIT FFYSRYGFGY HIGFSDIARG GWRTVICRTA
DDLVTNANTL FRENFVLAHT QHLKNKDIYE GGSKLVTLLD ASDLMRERER EREVETWRLY
KLQFGITGAF LDIFTTENGV AKHPAVVDYY REDEPIELGP DENMHDTMIE TIAAMSKRRG
YMLGIGIMSS KKVGINHKEY GVTSTGVVKF AEITMKELGI DIRKDPFTLK LTGGPNGDVA
GNALRILLKR SPKVNIALIL DGTAAVCDPA GADHGELGRI LLKQDLDGFD PAALHSGGFM
LFRTGSRREG LRELFRRVTK TDGGVVEEWI SLDEFSKEYG DLVFTVPADL FIPAGGRPET
IDKDNWERFL LPDGTPSARA IVEGANSFIT PAARIELQKK GIIVMRDASA NKCGVISSSY
EIIANLLLSE KEFLEHKERY VADVLQILEK RAGDEARLIL RRRREQPGLL CTEISDSLST
EINANYARLF RFFQGRPGLA LQPLFRRAVL THLPRIIADE PRFRRRLARL PQKYLSAILA
AEIGSSMVYK GDREAEFEDM IRLHLTRNFP SA
|
|---|
| |