Gene Gmet_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1679 
Symbol 
ID3740529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1886800 
End bp1887492 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID637778964 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_384635 
Protein GI78222888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000101055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAC TCCAGGCTTC AGTCGGATAT TTGGGGAAAA ATATCGAAAA TGATGTGGAA 
ACAGTCCAAA GCCTCCTGAA GTCCAAGGGC TTTGACCCAA AGGGGATTGA TGGCGTTTGC
GGCAAGGACA CCATCGCGGC GATACGCAGC TTCCAGGCCA CGTTCATGAC GAACCCCGAC
GGGCTCATAG AACCGGGGCG CAAGACCTGG CTCAAACTTG CGGGCACGGG TGGCGCAGCC
ACTGCCGATC TTTCCCCGTG GTGCGGCGAC AGCGCCCGAT GGTCCCAAGA GAAGAAACTC
CAGAGCATGC ATCCGGAACT GCGCCAGAAG GTTGCAGCGG TTCTGCAGGC GCTCGCCGGA
CGCGGCTTCC AGCCGAAGGT TTTTTATGGC TGGCGCTCGG TGGCGGTCCA GATGCAGCTC
TACTATCAGG GGAACAGCAA GGTGAAGTTC AGCTTCCACA ACGCCCAGCA TCCCGACGGA
ATCCCCAACG CCTATGCGGC AGATATTGTG GACAGCCGCT TCGGCTGGGC TCCGGAGGCG
GAACAGACGG GATTCTGGAA AGCCCTTGGC GAGGAGGCCA AGGAACTGGG CCTCGTCTGG
GGAGGGGACT GGGTGAATTT CCGCGACTGG GCCCACGTAC AGCTGGTGCC TAATGATGAA
CTTGGCCGGG TCAAACGGGA GAGCGGCCTG TGA
 
Protein sequence
MSVLQASVGY LGKNIENDVE TVQSLLKSKG FDPKGIDGVC GKDTIAAIRS FQATFMTNPD 
GLIEPGRKTW LKLAGTGGAA TADLSPWCGD SARWSQEKKL QSMHPELRQK VAAVLQALAG
RGFQPKVFYG WRSVAVQMQL YYQGNSKVKF SFHNAQHPDG IPNAYAADIV DSRFGWAPEA
EQTGFWKALG EEAKELGLVW GGDWVNFRDW AHVQLVPNDE LGRVKRESGL