Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1665 |
Symbol | |
ID | 3740515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1869273 |
End bp | 1870469 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637778950 |
Product | secretion protein HlyD |
Protein accession | YP_384621 |
Protein GI | 78222874 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.454837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.558289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGCG GAATGAAAAC CACTTTCCAA CCCTTACATT GCCTTGTGCT CTGGGTCCTG CCACTTCTCG CCCTTCTTCA GGCCGGATGC AAGAAGCCCC CGCCGCCCCC TCCCCCGCCC CCGAAGGTGA CCGTTTCTCA CCCCCTGAAA CGTGAAGTTA CCGATTACCT GGAACTGACC GGCAACACCC AGGCCGTCAA CTCTGTGCAG TTGGTCGCTC GTGTTCCCGG GTATCTTGAG AAGGTCTTTT TCCGGGACGG GCAGATGGTC ACCAATGGGC AACCGCTCTT TCAGCTACAG CGGAACACCT ATGAGGCCGC CCTCCGCCAG GCCGAAGGCC AGGTCATGGC GCTGAAATCG CAGCTTGAGT ACGCCGAAGG TCAACTGATC CGCTACTCCA ACCTGTTGCC CCATAAGGCC GCTACCCAGA CTGACGTGGA CAACTGGAGA TACCAGCGGG ACTCCGCCAG GGCTAACCTG AAAGCCGCGG AGGCGAATCG GGACCTCGCA AGGCTCAATC TTGGCTACAC CCTGGTCTCG GCCCCCTTTA GCGGACGGAT AGATCGGAGA CAGCAGGATC CGGGAAATCT GGTGGGCTCT GAAACGAACA ACACCGTTCT TGCCCAACTC ATCCAGATCG ACCCCATTTA CGTGTATTTC ACGGTCAGCG ACCTGGACCT GGCCCGGTTG CTCAAGACAA ACCGTCTTCC CGGCGTTGCC AAAACAGAAA AACGCCCGGT TTTTATCGCC CTTGCACAGG AAGAGGGTTA TTCGCACAAG GGTTATGTCG ATTTTGCCGC CACAAGCCTC ACCCCTACCA CCGGAACGCT GCTGTTACGG GGCGTCTTCC GGAATCCGTC AGGAAGGATA CTCCCCGGAT TGTACGCGAA GGTCCGTCTC CCGCTGGAGA GAAGGGTCGC TCTCCTGACT CCCGACACGG CAATAAGAAG CGACCAGCAG GGGTCGTACG TGCTGACCGT GAACGGCAAA AATACGGTGG AGCGGCGCGC CGTCAAGACA GGCCACCAGG AGGATTCCCT GCGCGTGATC GAACAAGGCC TTGACGGAAG CGAATGGGTC ATCGTCAAAG GACAGCTGAA AGCCCCCTCT GGAAGCCGTG TAACCCCCGT ACGGGAGGAT GCGGAGCCTG CGTCTGCCCC TTCCCGCACC ACCGCGGGAC CGAAGGTCAA GCCGTGA
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Protein sequence | MFRGMKTTFQ PLHCLVLWVL PLLALLQAGC KKPPPPPPPP PKVTVSHPLK REVTDYLELT GNTQAVNSVQ LVARVPGYLE KVFFRDGQMV TNGQPLFQLQ RNTYEAALRQ AEGQVMALKS QLEYAEGQLI RYSNLLPHKA ATQTDVDNWR YQRDSARANL KAAEANRDLA RLNLGYTLVS APFSGRIDRR QQDPGNLVGS ETNNTVLAQL IQIDPIYVYF TVSDLDLARL LKTNRLPGVA KTEKRPVFIA LAQEEGYSHK GYVDFAATSL TPTTGTLLLR GVFRNPSGRI LPGLYAKVRL PLERRVALLT PDTAIRSDQQ GSYVLTVNGK NTVERRAVKT GHQEDSLRVI EQGLDGSEWV IVKGQLKAPS GSRVTPVRED AEPASAPSRT TAGPKVKP
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