Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1589 |
Symbol | |
ID | 3740570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1790972 |
End bp | 1791886 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637778874 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_384546 |
Protein GI | 78222799 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000000648729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0689422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGTT TCATTGTTAT CGACAAGCCG GCCGGCTTGA CTTCCCACGA CATCATTGCG CGCGTCAGAC GGATTCTCGG CCAGAAGAAG GCGGGCCATA CGGGAACCCT TGATCCCTTT GCCACCGGAG TTTTGCCGGT TGCAATGGGA GAGGGGACCA AGGCGATACC GTTTCTTGAT GAGGCTGTGA AAGAGTACCG TGCAACCATG GTGCTCGGTG CTGCCACCGA TACCCAGGAC TGTACCGGCA GGGTCGAGAA AGAAGGGGAC TGGACTCGAT TGTCCGTTGA GGCGGTCAGG GAAGTTTTCG GTGCATATAT CGGAAAGTGC AAGCAGATCC CTCCCATGTA CTCTGCGGTC AAGCAAGGGG GGGTTCCCCT CTACCGACTA GCGCGAAAAG GGCATGAGGT GGAACGAGAA CCCCGGGATA TCGAGATCCA TTCCCTCATA ATCGATCGTA TGGAGCTGCC GCGAATTGAG TTTACGGTTT CCTGCTCCCG GGGCACCTAT GTGAGAACGC TGGCACACGA CATGGGGGAG CGCCTCGGTT GCGGCGCCCA TCTTTCTGCG CTGCGCAGAA CGCGGAGCGG CCCGTTTGAC CTTTCCCGGG CCGTGACCCT TGACGAACTG GCAAGCATCA AGGAACAAGG CGCTGTTGAT TCGCTTCTGC TGGCTCCCAA CGAGGTGCTT GGTCATTTTC CCGAGATCGA GCTCTCAGAC GAGGAAGTCC GCAAGGTTTA CTGCGGAGTC CCTCCCCGTT GCCATGGCAG ATGCGAAGAA TCTTCAGCGT CGCAAAATGA CGGTAAGAAG GTGCGTCTCG TTCAGAATGG CAAGCTTCTC GCTGTGGCTG AAATCGGTCA GGCTGAATCG GGTAACGGGA ACAAAAGCCT AAGGCTTATA AGGGTTTTTA ACTAG
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Protein sequence | MDGFIVIDKP AGLTSHDIIA RVRRILGQKK AGHTGTLDPF ATGVLPVAMG EGTKAIPFLD EAVKEYRATM VLGAATDTQD CTGRVEKEGD WTRLSVEAVR EVFGAYIGKC KQIPPMYSAV KQGGVPLYRL ARKGHEVERE PRDIEIHSLI IDRMELPRIE FTVSCSRGTY VRTLAHDMGE RLGCGAHLSA LRRTRSGPFD LSRAVTLDEL ASIKEQGAVD SLLLAPNEVL GHFPEIELSD EEVRKVYCGV PPRCHGRCEE SSASQNDGKK VRLVQNGKLL AVAEIGQAES GNGNKSLRLI RVFN
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