| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1575 |
|---|
| Symbol | |
|---|
| ID | 3740556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1775360 |
|---|
| End bp | 1776148 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637778860 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_384532 |
|---|
| Protein GI | 78222785 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000176204 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.426622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATA AAAAACTTCG TATCGAGATC CGCAATAAAG TCGGTTACAT CCTGCTGTGT
TCCGGCCAGC GTTTCAATAA ACTCAGCATT ACCACACTGA GAGAAGTGAA ACGGGCCATC
ACCGAACTTT CGCACAACCC CGAGGCGGTT TGTCTCGTCA TCACCGGTTA TCCGGGCGAA
TCCTTCGCCG TCGGCGCCGA TATCTCCCAA ATGGCGGAGT TCGGTCCTGC CGACGGCTTT
TCCTTTGGCG AGCTCGGGCA ATCATTGTTC GAGGCAATGG AGTCGTGTCC CAAGCCAGTC
ATCGGCGCTC TTAACGGAAT TACCATGGGG GGTGGATGCG ACCTGGCACT TGCCTGTGAC
CTGAGGATCG CCAGCGATGC ACTCGTCATT GCACACCCTG GCGCAAAACT GGGTATAATT
ACCGGTTTTT GCGGCACCCA GAAGCTGCCA CGTCTGGTGG GGAGAAATTA CGCCCGGGAA
ATCTTCATGA CCTCCGAACC TTACCGCGCT GCCGATGCCC TGCGGATGGG ACTCGTGGAC
CGGGTATACC CAGCCGGTGA ATTCTGGGAG CGGGTCGTGG CTTTTGCGGA GCGGATCGCT
AAAGTCTCGC CCGCTGCCCT TGCCATGGCA AAGAAGGCGA TCAATGCCGC CGAGGACTGT
GACCTGAAGA CCGGCTGCGC CCTCGAGGCA GCGTCTTATG CGTATCTCTT TGCCACGTCG
ACTGAGCGGG GGCGAATGAC TGAATTTTTG GAAGGAACGA CGAATGTCTT TGGCTCAGAG
GATACTTGA
|
|---|
| Protein sequence | MPYKKLRIEI RNKVGYILLC SGQRFNKLSI TTLREVKRAI TELSHNPEAV CLVITGYPGE
SFAVGADISQ MAEFGPADGF SFGELGQSLF EAMESCPKPV IGALNGITMG GGCDLALACD
LRIASDALVI AHPGAKLGII TGFCGTQKLP RLVGRNYARE IFMTSEPYRA ADALRMGLVD
RVYPAGEFWE RVVAFAERIA KVSPAALAMA KKAINAAEDC DLKTGCALEA ASYAYLFATS
TERGRMTEFL EGTTNVFGSE DT
|
|---|
| |