| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1335 |
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| Symbol | |
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| ID | 3738475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1493177 |
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| End bp | 1494193 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637778616 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_384295 |
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| Protein GI | 78222548 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0357756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAA ATACCTATTT TCTGCATAAC ATCCTCGTTA CCGGCGCAAC CGGCTTTGTA
GGTAGTTTTC TCTGCTCGCG TCTGCTTGCC GAAGGGATGT CTGTCCGTGG AACCTTTCTA
GTTACTGAAA ATCCCGATTC TCTTGTCAAG GGCACTGAAC AGGCATTGAT CGAACCAATT
GGGCCTGCCA CATTCTGGGG CCATGCGCTT GCTGGTGCTG GCACGGTTAT CCACCTGGCG
GCTCGTGTGC ATGTGATGCG GGAGCGTGCT GCTGATCCGT TGAAAGAGTT CCGGTTTGTA
AATACAGAGG GGACTGCACA CCTTGCACGG GAAGCTGCCA AAGCCGGCGT CAAACGTTTC
GTCTTTATGG GCACGATAGG TGTCAATGGC GACAACTCGG GAGATGCCCC TTACATTGAA
TCCAGCCCGC CATATCCCCA CAACCCTTAT TCTGTTTCGA AATATGAAGC CGAACAACTG
TTGCGGCAGA TATCTTCCGA GACAGGCATG GAGGTTGTGA TAATCCGTGC ACCCCTCGTC
TATGGGCCGG GAAATCCTGG TAATTTCCTC TCTCTGCTGA AGGCTGTCAA CGGCGATTAT
GGATTCAAAA CTTTGAATTT TGGATTGAAA GTCTTACCCC TCCCACTTGC CTCAATCAAT
AACAAACGTA GCCTGATCTA TGTCGGCAAC CTTGTTGATG CACTGGTAAC TTGCGCAACA
CATCCTGCCG CAGTTGGGCA GACATACCTC GTCAGTGATG GTGAAGATGT TTCTACTCCC
GAACTTATCC GTCGTACGGC CGCGGCTCTT GGGGTGCCGG CACGACTGTT CCCATTCCCA
GTTCCTCTTA TGAAGCTTGC TGGTAAACTG ATTGACAAGA GTGCTGCGGT CAATCGGCTG
ACCGGTTCTC TGACTGTTGA TAGCTCCAAA ATCAGGCGGG AGCTTGGCTG GCAACCGCCG
TTTACCATGG AAGAGGGATT GCAGGAGACT GCAAAATGGT TCGAAAAGCA AGGTTGA
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| Protein sequence | MQPNTYFLHN ILVTGATGFV GSFLCSRLLA EGMSVRGTFL VTENPDSLVK GTEQALIEPI
GPATFWGHAL AGAGTVIHLA ARVHVMRERA ADPLKEFRFV NTEGTAHLAR EAAKAGVKRF
VFMGTIGVNG DNSGDAPYIE SSPPYPHNPY SVSKYEAEQL LRQISSETGM EVVIIRAPLV
YGPGNPGNFL SLLKAVNGDY GFKTLNFGLK VLPLPLASIN NKRSLIYVGN LVDALVTCAT
HPAAVGQTYL VSDGEDVSTP ELIRRTAAAL GVPARLFPFP VPLMKLAGKL IDKSAAVNRL
TGSLTVDSSK IRRELGWQPP FTMEEGLQET AKWFEKQG
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