| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1292 |
|---|
| Symbol | |
|---|
| ID | 3739153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1451923 |
|---|
| End bp | 1452948 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637778572 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_384253 |
|---|
| Protein GI | 78222506 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00188773 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0000922476 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAATA CTTTTGTAAA ACGAAATCCT CCCTTGCAAA CGAGACAGGG GGGTGCTACA
CAAAACACCA TGAAGTGGCT GAAGAGACTC GTAAATCCCC TCATGGCCCT GATCGGCATC
CAGGTTGTCT GGGGGCTCCT GGTTTTTTTC TGGATCACCT GGTTCGTGGG TCGCCACAAG
GAGTTCCGGG AACTGGCCGA ACGCTACCGC CCCGAACTCC TGGGCCGCGG CTTCGACTGG
GCGGTGCTCG TGGAGGGGAT CGTACTCCTC GTCATCATCC TGGTGGGGGT CTACGTCATC
TTCATCTACT GGCGCCGCCA GTCGAACCTG AACCTGGAAC AGAAGGACTT CATCTCCCAG
GCGACCCACG AGCTCAAGTC GCCCTTGGCC TCCATCAAGC TCCACCTTGA GACGATCCGT
CTCCGCAAGC CTCCTCCCGA GAAGCTGGAA CGGTTCCTCG ATACCATGCT CGTGGATATC
GACCGGCTCG ACAACCTCAC CAGCAATATC CTGATGGTCG CCAAGCTTGA ACAGCGGCGC
CGTGCCTCCC AGTACCCGGT GGTGGATTTT TCCGCCCTGG TGACCCGGTA CATGGACCAG
CAACGCCACG TTCTCCCCGA GGGAGGGAAC GTGATCCTCG ACATTGAAAA AGGGATTTCG
GCGGCCATCG ATGTGGAGGG GATGGAAACG GTTCTGCGGA ACCTGTTCGA GAACGCGATC
CTGTACAGCA TCGGTGCCCC GGAGATCCGC GTAACGCTGA AACGGGATGG GAACCGCTGC
ACCCTCTCCT TCCAGGACAA CGGCAAAGGG ATAGACCGGA AAGACCTCAA GAATGTCTTC
CGAAAGTTCT ACCGCATCCG CAGCAGTGGC GAGGCCATCC GGGGGACCGG CCTCGGTCTC
TGGATCGTCA AGTCAGTGGT AAAGGAGCAC GGCGGAACCG TAACCGCCAC GAGCGCGGGT
ATCGGAGAGG GGACTAGCTT CATCATCAGC CTCCCCCTCC CCCGCCGTAA GAGGGGCTCC
CCATGA
|
|---|
| Protein sequence | MCNTFVKRNP PLQTRQGGAT QNTMKWLKRL VNPLMALIGI QVVWGLLVFF WITWFVGRHK
EFRELAERYR PELLGRGFDW AVLVEGIVLL VIILVGVYVI FIYWRRQSNL NLEQKDFISQ
ATHELKSPLA SIKLHLETIR LRKPPPEKLE RFLDTMLVDI DRLDNLTSNI LMVAKLEQRR
RASQYPVVDF SALVTRYMDQ QRHVLPEGGN VILDIEKGIS AAIDVEGMET VLRNLFENAI
LYSIGAPEIR VTLKRDGNRC TLSFQDNGKG IDRKDLKNVF RKFYRIRSSG EAIRGTGLGL
WIVKSVVKEH GGTVTATSAG IGEGTSFIIS LPLPRRKRGS P
|
|---|
| |