| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1283 |
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| Symbol | |
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| ID | 3739144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1443385 |
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| End bp | 1444836 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637778563 |
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| Product | sigma-54 (RpoN) |
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| Protein accession | YP_384244 |
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| Protein GI | 78222497 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000990086 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATTG AAATGCGTCA ACAGATGAAG CTGACCCAGC AACTGGTGAT GACTCCCCAG
TTGCAGCAGG CCATCAAGCT TCTCCAGCTC TCACGGCTTG AGCTTCAGGA TCTTGTCCGT
CAGGAAATGG AGGAGAATCC GGTCCTTGAG GAAACCCTCG AACTGGAGGA ACCCAAAGAG
CAGGACCAGT TGGAGCAGTC CGAAAAGGAA GAGACACCTT CTGGTGAGGA CAACAAGGAG
TTCCAGGAGG TGAAAGCGGG CGAGGAAACG CTGCGCGAAA CCGACTGGGA CAGCTATCTC
GAAGGTTATA ATTTCAGCGC GGGCGAGCAG TATTACGACG ACGAAGATCG CCCCTCCTAC
GAAAATGTCC TGACCCGCAA GGGCACGCTC GGTGATCACC TCATGTGGCA GTTGAGCCTC
ACCCGGTTTT CTGACGTGGA GACGGCGGTG GGTGCCGAGA TTATAGGCAA TATCGATGAA
GACGGCTATT TCCGTGCCAC AGTGGAGGAA ATTGCGCGAT CGCAGGGCGT TGACGAAGCC
CTTGTCGAGA CATGTCTCAA AAAGGTTCAG GAATTCGACC CCATGGGGGT TGGTGCGCGG
GACCTCAGGG AGTGCCTCCT TATTCAGGTG GAACAGCTTG GAATGGGGGG AAGCGTCGTG
GAGGGGATCC TGCGTCATCA CCTCCACGAT CTTGAAGCCC GCAAATACAA GCAGATTGCC
AAGGCCCTCG GGGTCGACAT CAACGATGTC CTCATGGGGG CGCGGATCAT TGCCGGGTTT
GATCCCAAGC CGGGGCGGGT CTATGGCTCC GAGGACGTCC ACTATATTTC CGCCGACATT
TTCGTTTACA AGATCGGAGA GGATTACGTG GTGGTGCTGA ACGACGAGGG ACTCCCCAAC
CTCCGGATCA GCCCCTACTA CGCGGGAGAA GCCAAGGCGA GCGGCCAGGT TGATGCCAAG
GCCGAGGAAT ACATCAACGA CAAGGTCCGT TCGGCCATGT GGCTCATTAA GAGTATTCAC
CAGCGGCAGC GGACCATTTA CAAAGTGGCC AAGAGCATCT CCAAGTTCCA GCGCGATTTT
CTCGACAAGG GGATTGAATA TCTTCGCCCC CTGGTGCTCC GCGATGTGGC CGAGGATATC
GGCATGCACG AGTCGACCAT CAGCCGCGTC ACCACCAACA AGTACATGCA GACCCCCCAG
GGGCTCTTCG AAATGAAGTA TTTCTTCAAC AGCGGCATTT CCACGGGAGA GGGTGATTTC
ATCGCCTCCG AGAGTGTCAA GAACAAGATC AAGGAAATCG TCGAGGCCGA GGATCCCCGT
AAGCCTTACA GCGACCAGCG TATCGCCGAT CTTCTGTCGG CCCACAGCAT TAACATCGCC
CGGCGCACGG TCACCAAGTA CCGTGAGATG CTGAGAATAG GATCGTCTTC GGAGCGCAAG
CGGCATTTCT GA
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| Protein sequence | MAIEMRQQMK LTQQLVMTPQ LQQAIKLLQL SRLELQDLVR QEMEENPVLE ETLELEEPKE
QDQLEQSEKE ETPSGEDNKE FQEVKAGEET LRETDWDSYL EGYNFSAGEQ YYDDEDRPSY
ENVLTRKGTL GDHLMWQLSL TRFSDVETAV GAEIIGNIDE DGYFRATVEE IARSQGVDEA
LVETCLKKVQ EFDPMGVGAR DLRECLLIQV EQLGMGGSVV EGILRHHLHD LEARKYKQIA
KALGVDINDV LMGARIIAGF DPKPGRVYGS EDVHYISADI FVYKIGEDYV VVLNDEGLPN
LRISPYYAGE AKASGQVDAK AEEYINDKVR SAMWLIKSIH QRQRTIYKVA KSISKFQRDF
LDKGIEYLRP LVLRDVAEDI GMHESTISRV TTNKYMQTPQ GLFEMKYFFN SGISTGEGDF
IASESVKNKI KEIVEAEDPR KPYSDQRIAD LLSAHSINIA RRTVTKYREM LRIGSSSERK
RHF
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