Gene Gmet_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0901 
Symbol 
ID3738239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp991444 
End bp991989 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID637778180 
ProductXRE family transcriptional regulator 
Protein accessionYP_383868 
Protein GI78222121 
COG category[K] Transcription
[S] Function unknown 
COG ID[COG1396] Predicted transcriptional regulators
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00000108423 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGATCG GCGAGCGGTT GAAGCGGCTC AGGATGATCA ACTCCCTCAC CCAGGAGGAA 
CTGGCAAATC GGGCCGACCT GACCAAAGGG TACATCTCCC AGTTGGAGAA CGACGCCACA
TCTCCCTCCA TCGCCACCCT GAAGGATATC CTCGACGTCT TCGGCGTCAG TATGCAGGAG
TTCTTCAGTG ACCCCATCGG CGAGGATGTG GTCTACGGCA AGGATGCCCG GGTCCAGCCC
TCGGCCGACG ACGCGGCCGT CACGGTGGAG CTTCTTGTCC CCGGCGCCCA GAACCGGGAG
ATGGACCCGG CCCTGGTGAC CCTGGCCCCG GGCGAGGAGA TGGACGAGCA GAATTTCCAC
GAGGGGGAGG AATTCGGTTT TGTCCTCCTC GGGAAGATCC AACTCCGGTT GGATGACAAG
ATCTACACGG TGAAGAAGGA CGAGTGCTTC TACTTCACCT CGGACAAGCG GCACACGGTG
AAGAATATCG GCAAGGGGTC GGCCCGAATA CTATGGGTCG TAACCCCGCC TACCTTTGAT
TATTAA
 
Protein sequence
MKIGERLKRL RMINSLTQEE LANRADLTKG YISQLENDAT SPSIATLKDI LDVFGVSMQE 
FFSDPIGEDV VYGKDARVQP SADDAAVTVE LLVPGAQNRE MDPALVTLAP GEEMDEQNFH
EGEEFGFVLL GKIQLRLDDK IYTVKKDECF YFTSDKRHTV KNIGKGSARI LWVVTPPTFD
Y