Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0901 |
Symbol | |
ID | 3738239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 991444 |
End bp | 991989 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637778180 |
Product | XRE family transcriptional regulator |
Protein accession | YP_383868 |
Protein GI | 78222121 |
COG category | [K] Transcription [S] Function unknown |
COG ID | [COG1396] Predicted transcriptional regulators [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00000108423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGATCG GCGAGCGGTT GAAGCGGCTC AGGATGATCA ACTCCCTCAC CCAGGAGGAA CTGGCAAATC GGGCCGACCT GACCAAAGGG TACATCTCCC AGTTGGAGAA CGACGCCACA TCTCCCTCCA TCGCCACCCT GAAGGATATC CTCGACGTCT TCGGCGTCAG TATGCAGGAG TTCTTCAGTG ACCCCATCGG CGAGGATGTG GTCTACGGCA AGGATGCCCG GGTCCAGCCC TCGGCCGACG ACGCGGCCGT CACGGTGGAG CTTCTTGTCC CCGGCGCCCA GAACCGGGAG ATGGACCCGG CCCTGGTGAC CCTGGCCCCG GGCGAGGAGA TGGACGAGCA GAATTTCCAC GAGGGGGAGG AATTCGGTTT TGTCCTCCTC GGGAAGATCC AACTCCGGTT GGATGACAAG ATCTACACGG TGAAGAAGGA CGAGTGCTTC TACTTCACCT CGGACAAGCG GCACACGGTG AAGAATATCG GCAAGGGGTC GGCCCGAATA CTATGGGTCG TAACCCCGCC TACCTTTGAT TATTAA
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Protein sequence | MKIGERLKRL RMINSLTQEE LANRADLTKG YISQLENDAT SPSIATLKDI LDVFGVSMQE FFSDPIGEDV VYGKDARVQP SADDAAVTVE LLVPGAQNRE MDPALVTLAP GEEMDEQNFH EGEEFGFVLL GKIQLRLDDK IYTVKKDECF YFTSDKRHTV KNIGKGSARI LWVVTPPTFD Y
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