| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0813 |
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| Symbol | |
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| ID | 3738971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 895706 |
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| End bp | 897046 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637778091 |
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| Product | nodulation efficiency protein NfeD |
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| Protein accession | YP_383780 |
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| Protein GI | 78222033 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000363847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000000223757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCGGA TAATTACGCT CTGTATCCTC TTGTGCTGTC TACTGCCAGC CGTCGCCCTC
CCTGCCGATT CGGCGACGGT GCGGGTGCTG GGCGTTCGCT CGGCCATCAA TCCCGTCACT
GCTTCGTTTC TCAAGCGGAA CCTTGTCGAC GCCGCCCGCA GGGGAGATCG CCTCGTCCTC
ATCGACATGG ATACCCCGGG CGGCCTCGAT ACTGCCATGC GGGAGATCGT GAAGGATATC
CTCGCGAGCC CGGTGCCGGT GGCGGTCCAC GTGGCCCCGT CGGGGGCGCG GGCCGCATCG
GCCGGCGCCA TTATCTGCCT AGCGGCCGAC ATCTGCGCCA TGGCACCCGG AACCACTATC
GGCGCGGCCC ATCCCGTTTC CATCGGCGAG AAGCAGGACA AGGTCATGGA AGAGAAGGTG
GTGAACGATG CCGAGGCCTA CGCCGAGGGG CTCGCGAACC GGCGGGGGAG AAACGCCGCC
GTGGCGCGGC GGATGGTGCG GGAGAGCCTG TCGCTCTCCG CTGAGAAGGC TCTTGCAGAG
AAGGTGGTAG ATCTGATCGC CGCCGACCGT GCCTCGCTCC TGGCTCAACT GGAGGGGCGT
CGGGTGGCTC GCCCCGGCGG AGACGTGGTC CTCGGGCTTG CCGGCGCCGT TGTCAGGGAG
GAGCCGATGA CGGCGCGGGA GCGGATTCTC GATGTCATCG GCAATCCCAA CGTGGCCTAC
ATCCTGATGA TGCTCGGGTT CCTCGGGATC TTTTTCGAAC TCTCCAATCC TGGGGTGATC
CTTCCCGGGG TGATCGGCGG CATCTCCCTC ATCCTCGCCT TCTTTGCCTT TCAGACCCTG
CCGGTGAACT ACGCCGGCGT GCTCCTGATC CTGCTCGCGC TCATCCTGTT CATCGCCGAG
ATCAAGATCG TTTCCCACGG AATGCTGACG GTCGGAGGGG TCATCGCCAT GGTACTCGGG
TCGCTGTTGC TGTTCGAATC ACCAGAGCCC TATCTCCGGG TGTCGTGGCA GGTCATTGCC
ATAACGGTGA TCGCCATCTC CGCCTTTTCC GTCTTTGCCG TCACCATGGC GGTCAGGGTC
CACCGCCGCA AGCCCACCAC CGGCGGCGAG GGGCTCCTGG GGGAGAGCGG CAAGGCCCTT
TCCGCCATCT CTCCCGAGGG GAGGGTCTTC ATCCACGGCG AGTACTGGGA CGCCTGGAGC
GACGAGCCCC TGGCCGAGGG GGACAGGGTG ACGGTAGTGG CGGTTGAGGG GATGCGGGTT
AAGGTCAGAA AGACCGGTGA TCGGGGACCG GGAAAGGCCT TTAGGCAAGG ACTGCCATGT
GATGCTGTCA TTATTGCGTA A
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| Protein sequence | MHRIITLCIL LCCLLPAVAL PADSATVRVL GVRSAINPVT ASFLKRNLVD AARRGDRLVL
IDMDTPGGLD TAMREIVKDI LASPVPVAVH VAPSGARAAS AGAIICLAAD ICAMAPGTTI
GAAHPVSIGE KQDKVMEEKV VNDAEAYAEG LANRRGRNAA VARRMVRESL SLSAEKALAE
KVVDLIAADR ASLLAQLEGR RVARPGGDVV LGLAGAVVRE EPMTARERIL DVIGNPNVAY
ILMMLGFLGI FFELSNPGVI LPGVIGGISL ILAFFAFQTL PVNYAGVLLI LLALILFIAE
IKIVSHGMLT VGGVIAMVLG SLLLFESPEP YLRVSWQVIA ITVIAISAFS VFAVTMAVRV
HRRKPTTGGE GLLGESGKAL SAISPEGRVF IHGEYWDAWS DEPLAEGDRV TVVAVEGMRV
KVRKTGDRGP GKAFRQGLPC DAVIIA
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