| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0600 |
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| Symbol | |
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| ID | 3740609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 669424 |
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| End bp | 671562 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777874 |
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| Product | PKD |
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| Protein accession | YP_383568 |
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| Protein GI | 78221821 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000134554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.252595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTG AAGATGGCTC TGAAAGGGGG CGCCTGACCG TTTTTGCGCT GCTGGCACTG
TTCCTGTTCG TGCCGATTAT GCAGCCCGAG GCCCATGCGC TTGTTGAGAA CAATTGCAGG
GGGTGTCATA ACGATGCGCA GGGGAAAACC GCGGACCGGC ACCATGCGCT GCTCAGTCTA
GGAAAGCAAT GTCTTGACTG CCACCAGATG GTTGGTCCGT CCGGAAGTCA GACTCCTGTT
GTGGTTCGCG ATTGCATTGC ATGTCATGGC GACCTGATTC ACCAGGGACG ACACCATCAA
CTGATCGCTG AGCGCGGTAA ACAATGCCTT GACTGTCACC AGATAGTTGT GGACGCTTCC
GGCGCCAATA CGCCCGTTGT GGTCCGGGAC TGCAGTGTCT GTCATGCGAC CATGAACCCC
AAGACCAATC ACAATAATGC CATGGCCGAT GTCAGTTGCG CCCAGTGCCA TAACCTTGGT
GTGGTGAACG AGCATCTTTC CCGCACGTCC ACCTGCTATA CCTGTCACAG CAGCGTTAAT
GTCACGGTGC AACAGACTAT ACTTTCCGCA AAGACAGGGG TCGTGGTCAC CTGTACTTCC
TGCCACGTTG GTTTTGATCA CGTAGCCCAG CACAACATGG TGGTAACGCC TGCGGACTGC
GCAGGGTGCC ACACTCAGGG AGTGGTTTAC GAGCACACGA ACCGGACCTC CACCTGCGCC
ACCTGCCACC AGAGCACCAA CGCCACCGTT CAGAAAACGA TCACCGACGG TCGGAACAAT
ATCCAGGTAT CCTGCGCCAA CTGCCACGGC ACGGTGAACC ACATTGCCCA GCACGACATG
GCCCAGACCG CGGCCGAGTG CGCCCAGTGC CACACCAAGA GTGTCCTTGA CGAGCACCTG
ACCCGGACTT CCACCTGCGC CACCTGCCAC TCCAGCTCCC GGGTTGAAGT CCAGAACGCC
ATCACCGCCG GCCGTGCCGG CACGGTGGTC AACTGCGTCA CCTGCCACGG CCAGTACAAC
CATCCCACGG CCCACACCGG CAAGGTCAGC GCTCCCTACG CCGACTGCAA CACCTGCCAC
ATCACCAACC TGACCGACCT GCACGCCCAG CGGGGCTTCC AGTGCGCCGC CTGCCACGCC
AGCACCAACA CGGCCATAAC CGCGGCTGTT CAGAAAGGTC TCGGTGGCCA ACCGGTTGTC
TGTGCCGACT GCCACAACGC CATCGGCGGC TTCGGCAACC ATGCGAAGCA GCACGACATG
GTCACCCTCA ACAGCACCAC CGGCTTCATC GCCGCCCATG AAGAGAAAAT GGTTTACTGC
TTCACCTGTC ACAACAACAC TAACGCCGGC TACCAGAAAG CCATCAACGA TGGCATGGCC
GGCATACCGC AGACCTGCAC CTCCTGCCAC GCCGCTTACG GCAACCAGCC TCCGGTGGCC
AACGCCGGCG CCAATGTGAC CACCACCGTC AACAAGGCAG TGACCCTCTC CGGGGCCGCT
TCCAGCGACC CGGACGGCAC CATCGTATCG TACGCCTGGA CCTTCGGCGA CGGCACCACC
GGCAGTGGCG TCTCCGTCAC CAAGACCTAC GCCACGGCCG GCACCTACAC CGTGACCCTG
ACCGTCACCG ACAACGCCGG CGCCAGCGCC AGCGCCACCA CCATCGTCAC CGTCCAGGCG
GCCCCGACCA GCAGCTCGGT CTTTGCCGAC CAGGTTCTGT CCATGCAGCG GCTCTACTCC
GTCACCTCCT CGGACAGCAA CAGCAGCGAC GTCACCGCCA ACTTCCGCGA CGGCAACACT
ACCGACCGCT ACCTGCTGCA GTATGGCAGC AGCGGCAGCA ACTACGTCAT CGCCATGAAA
CTGAACCGCG ATGCCCTGAC CGCCACCAAG GTGGTGCTGC GGGTGTATGT CTCCTCCATC
AGTTCCTCGC GGACCTTGAG GATCTACCCG TACCAGTCCA ACGGAACCTC GGTGAACACC
CGCTACTACA CGAGCTACAG CACGAGCAGC ACCGGGTGGA AGGATATCGA CGTCACTTCC
ATCGCCCAGC AGATGAACGG CTACGGCTGG ATGAAGTTCC GTGTCACCCC CACTTCGAAC
AGCCTCTACG TTGCCGAGGG TGCCTTCCAG GTACAGTAA
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| Protein sequence | MKTEDGSERG RLTVFALLAL FLFVPIMQPE AHALVENNCR GCHNDAQGKT ADRHHALLSL
GKQCLDCHQM VGPSGSQTPV VVRDCIACHG DLIHQGRHHQ LIAERGKQCL DCHQIVVDAS
GANTPVVVRD CSVCHATMNP KTNHNNAMAD VSCAQCHNLG VVNEHLSRTS TCYTCHSSVN
VTVQQTILSA KTGVVVTCTS CHVGFDHVAQ HNMVVTPADC AGCHTQGVVY EHTNRTSTCA
TCHQSTNATV QKTITDGRNN IQVSCANCHG TVNHIAQHDM AQTAAECAQC HTKSVLDEHL
TRTSTCATCH SSSRVEVQNA ITAGRAGTVV NCVTCHGQYN HPTAHTGKVS APYADCNTCH
ITNLTDLHAQ RGFQCAACHA STNTAITAAV QKGLGGQPVV CADCHNAIGG FGNHAKQHDM
VTLNSTTGFI AAHEEKMVYC FTCHNNTNAG YQKAINDGMA GIPQTCTSCH AAYGNQPPVA
NAGANVTTTV NKAVTLSGAA SSDPDGTIVS YAWTFGDGTT GSGVSVTKTY ATAGTYTVTL
TVTDNAGASA SATTIVTVQA APTSSSVFAD QVLSMQRLYS VTSSDSNSSD VTANFRDGNT
TDRYLLQYGS SGSNYVIAMK LNRDALTATK VVLRVYVSSI SSSRTLRIYP YQSNGTSVNT
RYYTSYSTSS TGWKDIDVTS IAQQMNGYGW MKFRVTPTSN SLYVAEGAFQ VQ
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