| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0598 |
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| Symbol | |
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| ID | 3740607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 665619 |
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| End bp | 668039 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777872 |
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| Product | PKD |
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| Protein accession | YP_383566 |
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| Protein GI | 78221819 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01053] zinc finger domain, LSD1 subclass |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00146483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.752324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACTA AATTGAAAAA GTTGTTGCCG ACGCTGATGG TGGCGGGAGC GATGGCGGTT
GCGATGCTCC TCGGAACGGG CGCATCGAAC AACGCCATGG CGCTGACCAC GGACGACTGC
CGTGGCTGTC ATACCCCCCC ACTGCCCGAC ACTATTGCCA CTATGCACCA TAGCCGGGCG
AATCTTAATG GATACGCGTG TGACTTTTGT CACAAGACTG TTTCCAACGG TTCCGGTGGC
TTCGTTCTGC TCGATGTCTA TAACTGCGGA TCATGCCACG CCCTGGTTGA CCACGCTGCT
GCCCACGACA AGGCGTCCAC CGCCCCTGAT TGCGCCCAGT GCCACAGTCT TGGCATGGTG
AACGAGCACC TCACGCGCAC TTCCACTTGC TCCACCTGCC ACAACAGCAC GAAGCCCGAA
GTGCAGAATA CCATCACGAT CGGCATGGGA CCCGCCGGGC AGCCGGTCAA CTGTCTCAAT
TGCCACATCA GCATCAACCA CATCGCCCAG CATGACAAGG CCGTTCCCTC GGCCGAGTGC
GTTTCCTGCC ACGCCCAGGG GGTTGTCTAC GAGCACCTGA ACCGTACTTC CACCTGTGCC
ACCTGCCACC AGAGTACCAA CGCGGCGGTG GTGAAGGCGA TCGCCGATGG CCGCGCCGGG
ATCACGGTCA ACTGCGTTTC CTGCCACGGG GTGGTGAACC ACATTGCCCA GCACGACAAG
GCCACGGCTA ACGTGGACTG CGCCCAGTGC CACAATCTTG GCGTGGTGAA CGAGCACCTT
TCCCGCACGT CCACCTGCGC CACCTGCCAT TCCAGCACGG TTCCGGCGGT GCAGCAGACC
ATCGCAACCG GCAAGGCAGG CACGGTGGTT ACCTGCTCCA ACTGCCACGT GAGTGTGAAT
CACATTGCCC AGCACAACAT GGTGGTAACG CCTGCGGACT GCGCAGGGTG CCACACCCAG
GGAGTGGTTT ACGAGCACAC GAACCGGACC TCCACCTGCG CCACCTGCCA CCAGAGCACC
AACGCCACCG TTCAGAAAAC GATCACCGAC GGTCGGAACA ATATCCAGGT ATCCTGCGCC
AACTGCCACG GCACGGTGAA CCACATTGCC CAGCACGACA TGGCCCAGAC CGCGGCCGAG
TGCGCCCAGT GCCACACCAA GAGTGTCCTT GACGAGCACC TGACCCGGAC TTCCACCTGC
GCCACCTGCC ACTCCAGCTC CCGGGTTGAA GTCCAGAACG CCATCACCGC CGGCCGTGCC
GGCACGGTGG TCAACTGCGT CACCTGCCAC GGCCAGTACA ACCATCCCAC GGCCCACACC
GGCAAGGTCA GCGCTCCCTA CGCCGACTGC AACACCTGCC ACATCACCAA CCTGACCGAC
CTGCACGCCC AGCGGGGCTT CCAGTGCGCC GCCTGCCACG CCAGCACCAA CACGGCCATA
ACCGCGGCCG TCCAGAAAGG TCTCGGCGGT CAGCCGGTAG TCTGTGCCGA CTGTCACAAC
GCCATCGGCG GCTTCGGTAA CCATGCCGGC CAGCATGACA AAATCAGCCT CATCGACCAG
ACCGGCTTCA TCGCCGCCCA TGAAGAGAAA ATGGTCTACT GCACCGCCTG CCACACCAGC
ACCAACGCCA CGGTGGTCAA GGTCATCAAC GACGGCATGG CCGGCATCCA GCAGAGCTGC
AACGCCTGCC ACACCGTAGC CGGCAACAAC CTGCCGCCGA CCGCCAACGC CGGCGCCGAC
GTGACGGTTG GGGTCAACCA GGCGGTCACC TTCACCGGCA GCGGCACCGA TCCCGACGGC
ACCATCGCCT CCTACGCCTG GAACTTCGGC GACGGCACCA CCGGCAGCGG CGCCAGCGCC
ACCAAGACCT ACACCACGGC CGGCACCTAC ACCGCGACTC TGACCGTCAC CGACAACGCC
GGGGCCACCG CCAGCGATAC CGTCATCGTC ACGGTCCAAG CGGCCCCGAC CAGCAGCTCG
GTCTTTGCCG ACCAGGTTCT GTCCATGCAG CGGCTCTACT CCGTCACCTC CTCGGACAGC
AACAGCAGCG ATGTCACCGC CAACTTCCGC GACGGCAACA CCACCGACCG CTACCTGCTG
CAGTATGGCA GCAGCGGCAG CAACTACGTC ATCGCCATGA AACTGAACCG CGACGCCTTG
ACCGCCACCA AGGTGGTGCT GCGGGTGTAC GTCTCCTCCA TCAGCTCCTC GCGGACCCTG
AGGATTTACC CGTACCAGTC TAACGGGACC TCGGTGAACA CCCGCTACTA CACGAGCTAC
AGCACGAGCA GCACCGGGTG GAAGGATATC GACGTCACCT CCATCGCCCA GCGGATGAAC
GGCTACGGCT GGATGAAATT CCGTGTCGCT CCCTCCTCGA GCAGCCTCTA CGTTGCCGAG
GGCGCCTTCC AGGTCCAGTA A
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| Protein sequence | MYTKLKKLLP TLMVAGAMAV AMLLGTGASN NAMALTTDDC RGCHTPPLPD TIATMHHSRA
NLNGYACDFC HKTVSNGSGG FVLLDVYNCG SCHALVDHAA AHDKASTAPD CAQCHSLGMV
NEHLTRTSTC STCHNSTKPE VQNTITIGMG PAGQPVNCLN CHISINHIAQ HDKAVPSAEC
VSCHAQGVVY EHLNRTSTCA TCHQSTNAAV VKAIADGRAG ITVNCVSCHG VVNHIAQHDK
ATANVDCAQC HNLGVVNEHL SRTSTCATCH SSTVPAVQQT IATGKAGTVV TCSNCHVSVN
HIAQHNMVVT PADCAGCHTQ GVVYEHTNRT STCATCHQST NATVQKTITD GRNNIQVSCA
NCHGTVNHIA QHDMAQTAAE CAQCHTKSVL DEHLTRTSTC ATCHSSSRVE VQNAITAGRA
GTVVNCVTCH GQYNHPTAHT GKVSAPYADC NTCHITNLTD LHAQRGFQCA ACHASTNTAI
TAAVQKGLGG QPVVCADCHN AIGGFGNHAG QHDKISLIDQ TGFIAAHEEK MVYCTACHTS
TNATVVKVIN DGMAGIQQSC NACHTVAGNN LPPTANAGAD VTVGVNQAVT FTGSGTDPDG
TIASYAWNFG DGTTGSGASA TKTYTTAGTY TATLTVTDNA GATASDTVIV TVQAAPTSSS
VFADQVLSMQ RLYSVTSSDS NSSDVTANFR DGNTTDRYLL QYGSSGSNYV IAMKLNRDAL
TATKVVLRVY VSSISSSRTL RIYPYQSNGT SVNTRYYTSY STSSTGWKDI DVTSIAQRMN
GYGWMKFRVA PSSSSLYVAE GAFQVQ
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