| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0274 |
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| Symbol | |
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| ID | 3738665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 303002 |
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| End bp | 306466 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637777549 |
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| Product | hypothetical protein |
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| Protein accession | YP_383244 |
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| Protein GI | 78221497 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA AGCTCGTGAC CTTTCTCAAG TGGTTTCTCG TGGCGGGAGG GGCGGCAGTG
GTCGTCCTTC TCGTTTTTGG TATTGTGCTC GCCCTCGACT GGCCCTGGTG GGTGGCCCTC
TGCATCCTCC TCCTTCTGGC GGGGATCGGG GTCGGCATTG TGCTGCTGCG GGCCATGTGG
CTGCGCAAGC GGGAGCAGAA TTTCGTCCAG GAGGTGATCG CCCGGGACAA GGGGCTCCTG
AAGGCCCTTT CCGGCAAGGA GCGGGAGCAC CTTACCCAGC TCCAGGAGCA GTGGAAGGAT
GCCATCGGCA CCCTGAAGAA TTCCCATCTC AAGAAGCAGG GAAACCCCCT TTACGTCCTC
CCCTGGTACC TGGTGATCGG CGAGAGCGGC TCCGGGAAGA CCACCTCCCT CAACAGCGCC
CGCCTGTCAT CCCCTTTCAT CGACGTCTGC CGGGCCTCCG GCGTTTCCGG CACCCGCAAC
TGCGACTGGT GGTTCTTCGA GGAATCCATC GTCATCGACA CGGCCGGTCG CTACGCGGTT
CCCATCGACA GCGAGAAGGA CCGGGACGAG TGGCAGAAGT TCCTGTCGCT CCTCGTCAAG
TACCGGAAGA AAGAGCCCCT GAACGGCCTC ATCGTCACCG TGGCGGCAGA CCGGCTCCTG
GCGGCGGGGC GCGAGGAGAA CGCGGAGGAG GGGCGCACCA TGCGGAGCCG CATCGACGAG
TTGATGCGGG CCCTGGGGGT GCGGTTCCCG ATCTATGTCC TCGTCACCAA GTGCGATCTG
GTTGAGGGGA TGAACCGCTT TGCCGGGCTT CTGCCGGAAA AGGCCCTCCG GCAGCCCATG
GGGATGGTGA ACCAGGAACT GGCCACGGAC GTGGTCACCT TCACCGACAA GGCGGTTGCC
GCCGTGGTGG AACGGCTCCG GACCCTCCGG CTGCTGCTTC TCCACCAGCC CGAGGCCCGG
GAAGCGGATC CGGGGCTCGT CCTCTTTCCC GAGGAGTTCG CGGTCCTGCG GGATGCCCTC
GCCGCCTTCA TGGAGGGGGC CTTCCGGGAA AACCCCTACC AGGAGACCCC GGTCATGCGG
GGGCTCTTCT TCTCCAGCGG CCGCCAGGAG GGGAATCCCC ATTCCCGCTT CTCCGAGGCC
TTGGGCCTCT CGGGGGAAAT GGCGGCGCTC CCCGGCACCA GCAAGGGTCT CTTTCTCCAC
GACTTTTTCG CCAGGATTCT CCCCGCCGAC CGGGCGCTCC TGGCGCCGAC CCGCCGTGCC
GTGGAGTGGC GGGCCCTCAC CGGGAACCTG GGGCTCGTCT CCTGGATGCT CCTGGGCGTG
GCCCTCTGTG GTCTCCTTTC CTTTTCCTTC GTGAAGAACA TGACCACCAT CCGCCAGGTC
TCCCATCAGT TCGAGCGGAC TCCGCGGCTG GCCGGCAACC CCACCAGCGA TCTCCTAGTG
CTCGACGCCT TCCGCCAGGG AATCCTGAAG GTGGAGGAGC GGAACCGCTC CTGGTGGATT
CCCCGTTTTG GCCTCACGGA GAGCGTCAAG GTGGAGCGGA CCCTCAAGGA GAGGTTCTGC
CGCCAGTTCC GGGACGGTTT CCTGACCCCC TACGACCGGC AGCTGGCCAC CGGTGTCGCG
GGCCTTTCCG CTGGCACCCC CGACGAGCTC TTCGCCCAGT ACGCCATCCA TCTGACCCGG
CGGATCAATA TCCTCAACGC CGGCATGAAC GGTAAAAAGC TGCCGGAACT GAGCGCCATG
CCCCAGCCGG CTTCGGTCTC CTTCCTGGCC GGCGAAACCG CCGCCGGTGC TGATGCCCGC
AAGCGGTTCG GCACCCTCTA CCTCCACTAC CTGGCCTGGC GGGCAGATTC CCCCGATCTT
GCCAAGGAGA CGGCCCAGCT TCAGGGGTGG CTCCGCCAGA TCATAGGCCT CAAGGGGGGA
AGCCTTTCCT GGCTTGCCCC GTGGATCGAC CGGCAGTCGG GGCTTCCGTC GGTGACCATG
GCCGAATTCT GGGGAGGGGG CGCGCCGCTC CCGGGAGAGG CAGCGGTTCC CCCCTCCTTT
ACCCGCAAGG GGAAGGGGGA GATGGACAGC CTCGTGGCCG AGCTGGAGAC GGCCCTCGGC
GACCCGCGCC TCGTGGCGGC GGGCAAGGGC GGCCTTGGCT CCTGGTACCG GGGGAGTTGC
CTGGCGGCGT GGCAACGGCT TGCCGCGGCG TTCCCCACGG GAAAGGAGCG GCTCCGCACT
GTCCGCGACT GGCAGCAGAC GGCCGCCAGA ATGGCCACAG ACCAGGGGCC CTATTTCGCC
TTCATCAACC GGATGTCCGC CGAGCTCGAT ACCCTCGTGG GCAAGGAGGG GGTACCTCCC
TTTGTGGTCC AGCTCTATGC CTTTCAGGTG GCCCGGGCGG GGGGTGCGGT TCCGGGCGCC
GTGGGGAAGG CCGCCGAGAG CGGCAAGCGT CTCATCAACT CCCTCGGCGA GAGGATTCAT
CCCGATGCCG CCGTGGCCAA GGGGATCGAA ACGCCCCTGG CGGCCCCGAA GGCCTGGCAG
GAGTACCAGA CGGCCCTGGC GGCCATCGCG CCGGCGGCAT CGTCGCGGCA GCAGGCCTTC
CAATTGGCCA CTCAGACCTT CGGCGACGAC CCGGCCACCG GCAAGACCCC CTTTATGGCC
GCCTGGGGCG CAGCCGGCCG CCTTCGGGCC GGAGTTGCCG GCGCCGGAGC CGACGAAGCC
TTCTGGCGGC TCGTGACCGG CCCCCTCGAC TACCTCTGGA CCTACGTCCG GCATGAGGCC
GGCTGCCAGC TCCAGACCCT CTGGGAGGAG CAGGTGATCG CCGCCACCCT CGGGATGCCC
CCCCAGCAGG CGGGCCCCCT GCTCCTTGGC CCCGACGGCC TTGCCTGGCG CTTCGTCAAG
GGGCCCGCAG CTCCCTTCAT CCGGGGGACC GCCGCCGGCT ACGCGCCCCG GCAGGCCCTC
GGGGTGGCAC TCCCCATCGA GGGGGCCCTC TTCGCCTTCC TCTCCAAGGG TGCCCAGATT
CAGGCCTCGG CTGGGGGGCG CCAGCCCAAC TACACCGTGG CCGTCAAGGG GCTTCCCACC
GACGCCAACG CCGATGCCCG GATCAGGCCC CACGCCACCC GGCTGGAGCT CCAGTGCGCT
GGCACCCCCC AGACCCTCGT GAACCAGAAC TTCCCCGTAG GGAAGACCTT CTACTGGTCC
CCCGAAACCT GCGGCGACGT CATCTTTCAG ATCGAGGTGG GTGACCAGGT TCTCACCAAA
CGTTACGGCG GTCCCCAGGC CTTCCCCGAC TTCCTCCGGG AGTTTGCCGG CGGTTCGCGC
ACTTTCCCGG CCCGGGAGTT CCCCGGCGAG AAGGAGGCCC TTGAGCGGAT GGGGATCAAG
CATATCCGCG TCAACTACCA GATCATGGGG GGAGGGCAGG TGGTCAAACA GGGGAGCGCC
ATGGCCGGCG CCACGGCCCC CCGGGTCATC GCCCGGTGCT GGTAA
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| Protein sequence | MKTKLVTFLK WFLVAGGAAV VVLLVFGIVL ALDWPWWVAL CILLLLAGIG VGIVLLRAMW
LRKREQNFVQ EVIARDKGLL KALSGKEREH LTQLQEQWKD AIGTLKNSHL KKQGNPLYVL
PWYLVIGESG SGKTTSLNSA RLSSPFIDVC RASGVSGTRN CDWWFFEESI VIDTAGRYAV
PIDSEKDRDE WQKFLSLLVK YRKKEPLNGL IVTVAADRLL AAGREENAEE GRTMRSRIDE
LMRALGVRFP IYVLVTKCDL VEGMNRFAGL LPEKALRQPM GMVNQELATD VVTFTDKAVA
AVVERLRTLR LLLLHQPEAR EADPGLVLFP EEFAVLRDAL AAFMEGAFRE NPYQETPVMR
GLFFSSGRQE GNPHSRFSEA LGLSGEMAAL PGTSKGLFLH DFFARILPAD RALLAPTRRA
VEWRALTGNL GLVSWMLLGV ALCGLLSFSF VKNMTTIRQV SHQFERTPRL AGNPTSDLLV
LDAFRQGILK VEERNRSWWI PRFGLTESVK VERTLKERFC RQFRDGFLTP YDRQLATGVA
GLSAGTPDEL FAQYAIHLTR RINILNAGMN GKKLPELSAM PQPASVSFLA GETAAGADAR
KRFGTLYLHY LAWRADSPDL AKETAQLQGW LRQIIGLKGG SLSWLAPWID RQSGLPSVTM
AEFWGGGAPL PGEAAVPPSF TRKGKGEMDS LVAELETALG DPRLVAAGKG GLGSWYRGSC
LAAWQRLAAA FPTGKERLRT VRDWQQTAAR MATDQGPYFA FINRMSAELD TLVGKEGVPP
FVVQLYAFQV ARAGGAVPGA VGKAAESGKR LINSLGERIH PDAAVAKGIE TPLAAPKAWQ
EYQTALAAIA PAASSRQQAF QLATQTFGDD PATGKTPFMA AWGAAGRLRA GVAGAGADEA
FWRLVTGPLD YLWTYVRHEA GCQLQTLWEE QVIAATLGMP PQQAGPLLLG PDGLAWRFVK
GPAAPFIRGT AAGYAPRQAL GVALPIEGAL FAFLSKGAQI QASAGGRQPN YTVAVKGLPT
DANADARIRP HATRLELQCA GTPQTLVNQN FPVGKTFYWS PETCGDVIFQ IEVGDQVLTK
RYGGPQAFPD FLREFAGGSR TFPAREFPGE KEALERMGIK HIRVNYQIMG GGQVVKQGSA
MAGATAPRVI ARCW
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