| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0258 |
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| Symbol | |
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| ID | 3738630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 289629 |
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| End bp | 290624 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637777533 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_383228 |
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| Protein GI | 78221481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.704286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA CAACTCCATC ACCCGTTACA ACTCCACGCA CTCCCCTCCC CTGGCCGACC
GGCCACACCC CCCTGATGCT GGCCCCCATG CAGGGGCTGA CGAACCGCGC CCTGCGTGCC
CTGTTCATCA ACTGGGTACG GCCCGATGTG GTCTTTACCG AGTTCATGCG GGTCAATCCC
GGCGGAGCGC GGCAGCCGAT CAGGGCGGGG GATCTGCGGG AGGTGGCCGC CGTGGAGGGG
GGCGTCCCCC TGGTGGTACA GCTCATCGGT CACGACCATA AAGCCCTGGT GGCCGCTGCC
CGGACGGCTC AGGAGGCCGG GGCAGTCCAC ATCAACCTTA ATCTCGGCTG TCCCTACGGA
CGGATGACTT CCGGCCTCAC CGGCGGAGGG ATGCTGCACC GCCCCGAGGC CCTGGAAGAG
CTCATCCCAG CCCTGCGGAG GGCCATTGCG GGGACATTTT CCGTCAAGGT CAGGGCAGGC
TACGACGACT CCGGGCAGAT AATGACCCTC CTCCCCCTGT TCGAGGAGGC GGGGGTCGAC
TTCCTGGTGC TCCATCCCCG GACGGTTGTG CAGGAATACA CCGGCCACGC CGACCATGCC
GTTACCGCCG AGGTGGTGCG GCAGACCCGG CTCCCGGTCA TCGCCAACGG CGACGTCCGG
AGCGCCGCCG ACGGTCTGCG GGTCCTGCGG AAAACGGGGG CGACGGGACT CATGCTGGGG
AGGGGAGCCA TCGCCGACCC CCTGCTGTTC CAGCGGCTCA GGGGCAAGGC GCCGGCCGAA
CCGACCGGTG AGGAACGGGT GGCAATGCTC AAGCGTTATC TGGGGGAGTT GCTGGAGGGA
TACGGCGAAA TCTTCTGCGG CGACACGCAG ATTCTGGGGA AGATCAAGGG AGTCATGGCC
ACCATGGACG ATCCCTTCCT GGCAAAGGGG CTCAAACAGC TCAAGAAAGC GCGGACTGTC
GCGGCCTTCG CCTCCACCCT GAGAGACATC CAATGA
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| Protein sequence | MHDTTPSPVT TPRTPLPWPT GHTPLMLAPM QGLTNRALRA LFINWVRPDV VFTEFMRVNP
GGARQPIRAG DLREVAAVEG GVPLVVQLIG HDHKALVAAA RTAQEAGAVH INLNLGCPYG
RMTSGLTGGG MLHRPEALEE LIPALRRAIA GTFSVKVRAG YDDSGQIMTL LPLFEEAGVD
FLVLHPRTVV QEYTGHADHA VTAEVVRQTR LPVIANGDVR SAADGLRVLR KTGATGLMLG
RGAIADPLLF QRLRGKAPAE PTGEERVAML KRYLGELLEG YGEIFCGDTQ ILGKIKGVMA
TMDDPFLAKG LKQLKKARTV AAFASTLRDI Q
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