| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0253 |
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| Symbol | |
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| ID | 3739716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 283347 |
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| End bp | 284162 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637777528 |
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| Product | UbiA prenyltransferase |
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| Protein accession | YP_383223 |
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| Protein GI | 78221476 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0707527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGG AGGCCAGTCG GCTGCTTCGA CCCCGTCTCG CGCTGCTGAA CGGCATCGCG
GCAGTGGCGG GGTGTCTCCT CGCCCCGGAG GGAGCGGCGA TGTCACTCAT CGTCGCATCC
CTGGCGGGGG TGACGCTTCT TGCTGCCGGG GGATCGGCCC TCAACCAGGT GATGGAACGG
GACCTGGATC TCCTCATGGA GCGGACCCGG CAGCGCCCCC TCCCCACGGG AGAGCTCTCT
CCTCGGGCGG CAACGGCCAT CGGCGGCATC AGCATCATCG CCGGCCTCGT TGTGCTTGCC
GGGACCGGGG GGATATTCCC CCCCCTCATC GGTGTCGGCG CCCTGGCCTG GTACCTGGGG
ATCTACACCC CCCTCAAGCG CCGCACTTCC TGCTCCCTCC TGGCCGGAGC CGTGAGCGGA
GCTGTTCCAC CCCTTGTGGG CTGGACCATA ACCGGCGGGA GTCTCGTCGA TTTCCGGATT
GTACTCGTGG CAGGCCTTCT CTATCTCTGG CAGATCCCCC ACTTCTGGTT GCTCCAGTGT
CGCCACGCAG AAGACTACCG GCGGGCGGGG CTCCCGCTCT TCGCTCCCGG CGTTACGGCC
GGCTCACCCG TCTTCAGGGT CTGGATCGGG GCATTCGCGG CAGGGACGCT CCTGCTGCCG
CTGTTCGGCA TCATCGGAGG CAGTGCCGCA CCCGGTTTTT GCGCTTTCCC TCTCCTCCTG
GTCCTCCTCG CATTCTCCCG AGCCGAGGGT GCCCTCTTCT CCAGCCTTAA CCTCTTCCCG
CTTCTGATGG TCCTGGCTCT CTATCTCCAG CGGTAA
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| Protein sequence | MIAEASRLLR PRLALLNGIA AVAGCLLAPE GAAMSLIVAS LAGVTLLAAG GSALNQVMER
DLDLLMERTR QRPLPTGELS PRAATAIGGI SIIAGLVVLA GTGGIFPPLI GVGALAWYLG
IYTPLKRRTS CSLLAGAVSG AVPPLVGWTI TGGSLVDFRI VLVAGLLYLW QIPHFWLLQC
RHAEDYRRAG LPLFAPGVTA GSPVFRVWIG AFAAGTLLLP LFGIIGGSAA PGFCAFPLLL
VLLAFSRAEG ALFSSLNLFP LLMVLALYLQ R
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