| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0178 |
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| Symbol | |
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| ID | 3739062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 206604 |
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| End bp | 208610 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637777454 |
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| Product | transketolase |
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| Protein accession | YP_383149 |
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| Protein GI | 78221402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC CAGTACTTAC CAGCGAAGAC GCCCGCCTCG GCGCCGATAC CCTCAGAATG
CTGGCGGTGG ACGCCGTGGA GGCGGCCAAC TCGGGCCATC CCGGGCTCCC CATGGGGGCT
GCGGACTATG CCTTCCTCCT CTGGCATTCC CACCTTCGCT TTGCCCCCAC CGACCCGGAA
TGGGCCGGAC GGGACCGCTT CGTCCTCTCG GCGGGGCACG GCTCCATGCT CCTCTATAGC
CTCCTCCACC TCTTCGGCTT TGACCTCCCC CTGGACGAGC TGAAACGGTT CCGCCAGTGG
GGGAGCCGCA CCCCGGGCCA CCCGGAGTTC GGCCACACCC CCGGCGTCGA GGTGACCACC
GGCCCCCTGG GGCAGGGGTT CGCCATGGGG GTCGGCATGG CCCTGGCGGC CCGGATGGCC
TCTGCCCGCT TTGCCGACGA GCGCTTCGAC CCGTGCGGCC ACCAGGTCTA CGCCATCGTG
AGCGATGGGG ACCTCATGGA GGGAATCAGC CAGGAGGCGG CCTCCCTGGC GGGACACCTG
AAGCTCGGCA ACATCGTTTA TATCTACGAC GACAACCGGA TCACCATCGA GGGGTCCACG
GATCTCGCCT TTTCGGATGA TACGGCCGGA CGCTTCACGG CCCTGGGGTG GCAGGTGCAG
AAGGTGGACG GCCACGATAT CGGCCAGGTG GGGGAGGCCC TCTGGCGGGC CAAGGTGGAG
CGGGACCGCC CCTCCCTCAT CATTGCCCGG ACCCACATCG CCCAGGGCTC GCCGGGAAAG
CACGACACGG CCGCCGCCCA CGGCTCCCCC CTGGGCGCCG AAGAGGCGGC CGCCACCCGC
AGGAATCTTG GGTGGCCCGA TGAACTGTTC CACGTGCCGG AGCGGGTGCG TGAGATCTGC
GACAAGCGTC GGGAGGAGCT TGTCGCGGCC TACGCCGCCT GGGAGGATGA GTTCCGCCGC
TGGCGCCGCC GCAACCCCGA CAAGGCCCGG CTCTGGGACG GCATGTGGCA GAAGGCGATC
CCGAAAGACC TGGAAACCCG GCTCCTAGCC GCCGTTGAGG GGAGTACCGG CGCCACCCGC
GCCCTGTCGG GAAAGGTGAT CCAGGCCGCG GCCGCGGCAA TGCCGGCCCT GGCCGGCGGC
TCCGCCGACC TGGAACCCTC CACCAACACC TGGATCGCGG AATCACCGTC GGTGCTTGCG
GGGAGCTACA GGGGGCGGAA CCTCCACTTC GGCATCCGTG AGCACGCCAT GGCCGCCGTC
ATGAACGGCA TGGCCCGCTA CGGCTGCTTC ATCCCCTACG GCGCCACCTT CCTGGTCTTC
TCCGACTACT GCCGGCCAAG CATCCGGCTC GCGGCCCTCA TGAAGCAGCA GGCGATCTAC
GTCTTCACCC ACGACTCGAT CTTCCTGGGG GAGGACGGCC CCACCCACCA GCCGGTGGAG
CAGCTCTCGT CGCTGCGGCT CATTCCCAAT CTCCGGGTCA TCCGCCCCGC CGACGGCCCC
GAGACGGCCC TGGCCTGGAA CGCGGCCCTG CGCCGCGCCG ACGGCCCCAC GGCCCTCATC
CTCACCCGCC AGAAGGTGCC GGCCATCATG CGGGAGGAAC CACTGGATGC GAAAACCTTC
GCCAAGGGGG GGTACGCGGT CCGGCAAGAC GGGGCAACGC CCGACGTGGT CATCATGGCA
AGCGGTTCCG AGGTGGGGCT GGCCCTGGCC GCGGCAGATA TCCTGGCCGG CGAAGGGGTG
ACGGCCCGGG TAGTGTCGGT CCCCTCTCTC GAAACCTTCC TGGCCCAGCC CGAGGCGTAC
CGGCGCCGGC TCCTGCCGGG CCGCGTCCCC CGGGTGGCGG TGGAGGCAGG GCACGGCGGC
CTCTGGTGGC GACTCCTCGG CCCGGGGGGC CTCTTCATCG GCATGGAGGG CTTCGGTGCC
TCGGCCCCGG AAAAGGTCCT TGCCGAGCAG TTCGGCTTCA CCCCGCCCCA AGTGGCCCAG
CGGGTAAGAG AGCTCGTGGG GCGCTAG
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| Protein sequence | MSAPVLTSED ARLGADTLRM LAVDAVEAAN SGHPGLPMGA ADYAFLLWHS HLRFAPTDPE
WAGRDRFVLS AGHGSMLLYS LLHLFGFDLP LDELKRFRQW GSRTPGHPEF GHTPGVEVTT
GPLGQGFAMG VGMALAARMA SARFADERFD PCGHQVYAIV SDGDLMEGIS QEAASLAGHL
KLGNIVYIYD DNRITIEGST DLAFSDDTAG RFTALGWQVQ KVDGHDIGQV GEALWRAKVE
RDRPSLIIAR THIAQGSPGK HDTAAAHGSP LGAEEAAATR RNLGWPDELF HVPERVREIC
DKRREELVAA YAAWEDEFRR WRRRNPDKAR LWDGMWQKAI PKDLETRLLA AVEGSTGATR
ALSGKVIQAA AAAMPALAGG SADLEPSTNT WIAESPSVLA GSYRGRNLHF GIREHAMAAV
MNGMARYGCF IPYGATFLVF SDYCRPSIRL AALMKQQAIY VFTHDSIFLG EDGPTHQPVE
QLSSLRLIPN LRVIRPADGP ETALAWNAAL RRADGPTALI LTRQKVPAIM REEPLDAKTF
AKGGYAVRQD GATPDVVIMA SGSEVGLALA AADILAGEGV TARVVSVPSL ETFLAQPEAY
RRRLLPGRVP RVAVEAGHGG LWWRLLGPGG LFIGMEGFGA SAPEKVLAEQ FGFTPPQVAQ
RVRELVGR
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