| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0130 |
|---|
| Symbol | |
|---|
| ID | 3738037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 157342 |
|---|
| End bp | 157992 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637777409 |
|---|
| Product | putative prophage repressor |
|---|
| Protein accession | YP_383104 |
|---|
| Protein GI | 78221357 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTT CCCCCATCGT CCCGACCCCA TCCACAGGGA GACGGATCAA GGAAATCCGG
ATAAACAAAG GACTGACTCA GAAGGAGTTT GCCGACTCCC TCGGGATCGT GCAGGGATTC
CTCAGCGGCA TCGAGCGGGA GAAGAAGACC CCTTCGGACA CCCTCCTGAT CGCCCTCTGT
AATCTCTATG AAATAAGCCC GTCATGGCTC GCCTCGGGAG AGGGAGAAAT GTACCGGACG
CCGCGCCGCG CCGGGCAGCC CGCAACTTCT CCCGGTGGCG AAGGAATCCC GCTCCTGGAG
CGGATAGGGC CAGAGTTTCC CCACCGGGTC GGGGAGGATG ACATCCGTGA TCGCGTGGCC
CTGCCGGAGG TCAGCGAGGG ATGCTACGCC ATCGTCGCCT ACGGTGATTT CATGGCCCCT
ACCATCCGGG ACGGCGACCT GGTGATCTTC AGGCCCGGGG AAGAACCCCA GAACGGCGAA
GTGGTCCTGG TGACCAACCG GTGGGGCGAG GCGATCCTGC GGCGGTATCG GGTCAGGAAC
GGCGATATCG TCTACTCCCC CGACAACGCC ACCTACTCCC CCTTCACCCC CGCCCCGGAG
ACGCGGATCA TCGGCACCGT GGCGGAGGTG TGGCGCAAGG TGAAACTATA G
|
|---|
| Protein sequence | MAVSPIVPTP STGRRIKEIR INKGLTQKEF ADSLGIVQGF LSGIEREKKT PSDTLLIALC
NLYEISPSWL ASGEGEMYRT PRRAGQPATS PGGEGIPLLE RIGPEFPHRV GEDDIRDRVA
LPEVSEGCYA IVAYGDFMAP TIRDGDLVIF RPGEEPQNGE VVLVTNRWGE AILRRYRVRN
GDIVYSPDNA TYSPFTPAPE TRIIGTVAEV WRKVKL
|
|---|
| |