Gene Syncc9605_2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2670 
Symbol 
ID3736315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2483401 
End bp2484678 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID637777254 
Producthypothetical protein 
Protein accessionYP_382950 
Protein GI78214171 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.131305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG ATCGTGGCGG TCAGGCCTTC CGGCTTGGCC TGTTTCTGCT TCCCTCCAGT 
GCTCTGCTCT CGGGCATCTG CCTCTTTGTG GCTTGTGTCA GCGGCAGTCG GGGCCGGGAT
CGGCCTATCT GGCAGGCCCG CTGGACCCAA CCGTTTCTGG TTGCGGCTGT ATTGATGCTG
GTGGGTGCGC TGGGGGCGGA AACAGGGTCG CTGGCCTGGG CTGGGTTGGG CAATTGGTTG
CCGTTGTTCT GGGCCTACTG GGCTTTTCAG CCTCATCTGG CCAGCGAACA GCAGCGCCGT
CAGGCCGCTT GGATGCTGGT GGCCGGCACC TTGCCGGTGC TGCTCACTGG CCTGGGGCAA
ATGTTTCTGG GTTGGCAGGG ACCCTGGCAA CTCGGAGGCG GCGCCATCAT CTGGTTCGTC
GCGCCCGGTG GTCAGCCGCA AGGGCGACTC TCGGCCCTGT TTGATTACGC CAACATCGCC
GGTGCCTGGC TCGGGGTGGT CTGGCCGTTG ATGCTGGCGG CTGTGCTGCG GCCGGATGGT
TGGTGGCGGC GTGGTGCTGC TCTGGTGCTC ACGCTTTCAA CGGTGCTTGC CGTTGTGCTC
ACCCAGTCGC GCAACGCCAT GGGGGCGCTG GCCTTATCGG TTCCCTTTGT GATGGGGCCG
ATGCAGTGGT TCTGGTTGCT CCCCCTGCTG CTTCTCCTCG CCTCGCCGTT GTTGTTAGTG
GTGCTCCCCG GTGTCCCGTC CGGATGGCGC CAACTGGCGA TGGCATTGGT CCCCGAGCCG
ATCCTTGATC GACTGCTTGA ACGGGGAGGG CCCACCGCCT GGAAACACAC CCGTCTGGGG
CAGTGGGGGT ATGCCTTGGA GTTGGTTGCG GCCCGCCCCT GGCTGGGCTG GGGGGCAGCC
GCCTTCAGCG TGCTGTACCC GATTTATGCG GCCAAGCGTT GGCATGGCCA TTCCCACAAT
CTCCCCCTGG AGTTGGCGAT CAGCCACGGC CTTCCGGTCA TGCTGTTGGT TGTCGGAACG
GTGCTGTTGT TGCCGGTGGT GGCTCTGCGG CGTGGAATCC TGCAGAAAGC ACCCATGGAA
CGGGCCTGGT GGACCGCCAC GCTGGTGCTG GTGGCGATGC ATGCCACCGA CCTGCCTTTG
TTCGACAGTC GCCTCAACAT TCTCGGCTGG ACGCTCTTGG CGGGTTTGGC TGCTTTTAAC
CAGGAGGTTG GGCAGATGCC ACAGCCAAGG CCTGATCGTG ATGGTCCCGC AGCATCGCCG
GAGCCAGGGG CCCCCTGA
 
Protein sequence
MTSDRGGQAF RLGLFLLPSS ALLSGICLFV ACVSGSRGRD RPIWQARWTQ PFLVAAVLML 
VGALGAETGS LAWAGLGNWL PLFWAYWAFQ PHLASEQQRR QAAWMLVAGT LPVLLTGLGQ
MFLGWQGPWQ LGGGAIIWFV APGGQPQGRL SALFDYANIA GAWLGVVWPL MLAAVLRPDG
WWRRGAALVL TLSTVLAVVL TQSRNAMGAL ALSVPFVMGP MQWFWLLPLL LLLASPLLLV
VLPGVPSGWR QLAMALVPEP ILDRLLERGG PTAWKHTRLG QWGYALELVA ARPWLGWGAA
AFSVLYPIYA AKRWHGHSHN LPLELAISHG LPVMLLVVGT VLLLPVVALR RGILQKAPME
RAWWTATLVL VAMHATDLPL FDSRLNILGW TLLAGLAAFN QEVGQMPQPR PDRDGPAASP
EPGAP