Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2670 |
Symbol | |
ID | 3736315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2483401 |
End bp | 2484678 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637777254 |
Product | hypothetical protein |
Protein accession | YP_382950 |
Protein GI | 78214171 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.131305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCTG ATCGTGGCGG TCAGGCCTTC CGGCTTGGCC TGTTTCTGCT TCCCTCCAGT GCTCTGCTCT CGGGCATCTG CCTCTTTGTG GCTTGTGTCA GCGGCAGTCG GGGCCGGGAT CGGCCTATCT GGCAGGCCCG CTGGACCCAA CCGTTTCTGG TTGCGGCTGT ATTGATGCTG GTGGGTGCGC TGGGGGCGGA AACAGGGTCG CTGGCCTGGG CTGGGTTGGG CAATTGGTTG CCGTTGTTCT GGGCCTACTG GGCTTTTCAG CCTCATCTGG CCAGCGAACA GCAGCGCCGT CAGGCCGCTT GGATGCTGGT GGCCGGCACC TTGCCGGTGC TGCTCACTGG CCTGGGGCAA ATGTTTCTGG GTTGGCAGGG ACCCTGGCAA CTCGGAGGCG GCGCCATCAT CTGGTTCGTC GCGCCCGGTG GTCAGCCGCA AGGGCGACTC TCGGCCCTGT TTGATTACGC CAACATCGCC GGTGCCTGGC TCGGGGTGGT CTGGCCGTTG ATGCTGGCGG CTGTGCTGCG GCCGGATGGT TGGTGGCGGC GTGGTGCTGC TCTGGTGCTC ACGCTTTCAA CGGTGCTTGC CGTTGTGCTC ACCCAGTCGC GCAACGCCAT GGGGGCGCTG GCCTTATCGG TTCCCTTTGT GATGGGGCCG ATGCAGTGGT TCTGGTTGCT CCCCCTGCTG CTTCTCCTCG CCTCGCCGTT GTTGTTAGTG GTGCTCCCCG GTGTCCCGTC CGGATGGCGC CAACTGGCGA TGGCATTGGT CCCCGAGCCG ATCCTTGATC GACTGCTTGA ACGGGGAGGG CCCACCGCCT GGAAACACAC CCGTCTGGGG CAGTGGGGGT ATGCCTTGGA GTTGGTTGCG GCCCGCCCCT GGCTGGGCTG GGGGGCAGCC GCCTTCAGCG TGCTGTACCC GATTTATGCG GCCAAGCGTT GGCATGGCCA TTCCCACAAT CTCCCCCTGG AGTTGGCGAT CAGCCACGGC CTTCCGGTCA TGCTGTTGGT TGTCGGAACG GTGCTGTTGT TGCCGGTGGT GGCTCTGCGG CGTGGAATCC TGCAGAAAGC ACCCATGGAA CGGGCCTGGT GGACCGCCAC GCTGGTGCTG GTGGCGATGC ATGCCACCGA CCTGCCTTTG TTCGACAGTC GCCTCAACAT TCTCGGCTGG ACGCTCTTGG CGGGTTTGGC TGCTTTTAAC CAGGAGGTTG GGCAGATGCC ACAGCCAAGG CCTGATCGTG ATGGTCCCGC AGCATCGCCG GAGCCAGGGG CCCCCTGA
|
Protein sequence | MTSDRGGQAF RLGLFLLPSS ALLSGICLFV ACVSGSRGRD RPIWQARWTQ PFLVAAVLML VGALGAETGS LAWAGLGNWL PLFWAYWAFQ PHLASEQQRR QAAWMLVAGT LPVLLTGLGQ MFLGWQGPWQ LGGGAIIWFV APGGQPQGRL SALFDYANIA GAWLGVVWPL MLAAVLRPDG WWRRGAALVL TLSTVLAVVL TQSRNAMGAL ALSVPFVMGP MQWFWLLPLL LLLASPLLLV VLPGVPSGWR QLAMALVPEP ILDRLLERGG PTAWKHTRLG QWGYALELVA ARPWLGWGAA AFSVLYPIYA AKRWHGHSHN LPLELAISHG LPVMLLVVGT VLLLPVVALR RGILQKAPME RAWWTATLVL VAMHATDLPL FDSRLNILGW TLLAGLAAFN QEVGQMPQPR PDRDGPAASP EPGAP
|
| |