| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2642 |
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| Symbol | |
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| ID | 3737836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 2453197 |
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| End bp | 2454738 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777226 |
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| Product | nitrate transporter |
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| Protein accession | YP_382922 |
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| Protein GI | 78214143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.436461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGCG ACCTCTGGTC GTTCCAGGGC AGGTACCGAA CCCTTCACCT GACCTGGATC
GCCTTCTTCC TGACCTTCGT GGTCTGGTTC AACCTGGCCC CTCTGGCCAC CACCGTGAAA
ACGGACCTGG GTCTGACCGT TGGTCAGATC CGCACCGTGG CCATTTGCAA CGTGGCTCTC
ACCATTCCGG CCCGCGTGCT GATCGGCATG CTCCTGGACA AATTCGGACC CCGGATCACC
TACTCCTCGA TCCTGGTGTT CTCGGCGATT CCCTGCCTGC TGTTTGCGTC CGCTCAGGAC
TTCAACCAGC TGGTGGTGGC ACGTTTGCTG CTCTCCATCG TTGGCGCCGG CTTCGTGATC
GGCATCCGCA TGGTGGCCGA GTGGTTCCCG CCCAAGGAAA TCGGCCTGGC TGAAGGAATT
TACGGCGGCT GGGGGAACTT CGGCTCCGCC TTCTCCGCCC TCACCATGGT GGCCCTCGCT
GGCTTCCTCT CCTTCTCCGG CGGCTTCGAG CTGCCCACCG GCGCTGTTCT GAACTGGCGC
GGTGCCATCG CCCTGACCGG CATCGTCTCC GCCGTCTACG GCCTCTTCTA CTTCTTCAAC
GTCACCGACA CCCCGCCTGG CAAGACGTAC CAGCGCCCTG AGAAAACCGC AGGTCTGGAA
GTCACCTCCA TGCGCGACTT CTGGGGACTG CTGGGCATGA ACGTGCCCTT CGCAGCCATT
CTCTGCGTGC TCTGCTGGCG TCTTGGCAAG GTGGGCTTCC TCACTCCAAG CACCTATCCA
TTGGCACTCG GTGCTGTTGC CGTCTGGTTT GCCTTCCAGA CCTGGGGAAT CATTCGTACC
AACCGCGACC TGATCCTCGG CAACAAGGTT TATCCCAAGG AAGACCGCTA CGAGTTCCGC
CAGGTTGCGA TCCTCGAGCT CACTTACATC GTGAATTTCG GCTCCGAACT GGCCGTGGTT
TCGATGCTGC CCACCTTCTT TGAAACCACC TTCGATCTGC CGAAGGCCAC CGCCGGAATC
CTTGCGTCCT GCTTCGCTTT CGTGAACCTG GTCGCCCGCC CTGCTGGTGG TCTTATCTCC
GACAGCGTCG GCAGCCGTAA GAACACCATG GGCTTCCTCA CCGCCGGTCT CGGCGTGGGC
TACCTGGTAA TGAGCATGAT CAAGCCGGGC ACCTTTACCG GCACCACCGG CATCGCTGTT
GCCGTGGTGA TCACCATGCT CGCCTCCTTC TTCGTGCAGT CCGGTGAAGG CGCCACCTTC
GCGCTGGTGC CCCTGGTCAA GCGTCGCGTC ACCGGTCAGG TGGCCGGCCT GGTGGGTGCC
TACGGCAACG TTGGTGCTGT GACCTACCTG ACCATCTTCA GCCTCCTGCC GATGTGGATG
GGCGGCGGCG GCGAACCCAC CCCCGAGGTG ATCGCGGCTT CCAACAGTGC CTTCTTCCAG
ATCCTGGGAG TGGCTGGTCT GATCGTGGCC TTCTTCTGCT TCTTCTTCCT GAAGGAACCC
AAGGGGTCCT TCGCAGACCT GCACGAAGGC GAAACCGCCT GA
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| Protein sequence | MLGDLWSFQG RYRTLHLTWI AFFLTFVVWF NLAPLATTVK TDLGLTVGQI RTVAICNVAL
TIPARVLIGM LLDKFGPRIT YSSILVFSAI PCLLFASAQD FNQLVVARLL LSIVGAGFVI
GIRMVAEWFP PKEIGLAEGI YGGWGNFGSA FSALTMVALA GFLSFSGGFE LPTGAVLNWR
GAIALTGIVS AVYGLFYFFN VTDTPPGKTY QRPEKTAGLE VTSMRDFWGL LGMNVPFAAI
LCVLCWRLGK VGFLTPSTYP LALGAVAVWF AFQTWGIIRT NRDLILGNKV YPKEDRYEFR
QVAILELTYI VNFGSELAVV SMLPTFFETT FDLPKATAGI LASCFAFVNL VARPAGGLIS
DSVGSRKNTM GFLTAGLGVG YLVMSMIKPG TFTGTTGIAV AVVITMLASF FVQSGEGATF
ALVPLVKRRV TGQVAGLVGA YGNVGAVTYL TIFSLLPMWM GGGGEPTPEV IAASNSAFFQ
ILGVAGLIVA FFCFFFLKEP KGSFADLHEG ETA
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