Gene Syncc9605_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2604 
Symbol 
ID3735314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2418644 
End bp2419456 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID637777190 
Productaminotransferase class IV 
Protein accessionYP_382886 
Protein GI78214107 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.946338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.143432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CAGTCGCCTG GATCGAGGGC CAGTGGGGAA CAGCTGCAAG CCTGCAGCTT 
CCCCTCGACG ACCGCGCCCT GCTCCTGGCC GATGGCCTCT TTGAAACCGT GCTGATCCGC
AACGGTGGGG CGCAACTCCT GCAGGAACAT CTGCAGCGAT GGAGCGAGAG TGCGGCCCTG
CTGGGCATGG ACCCACCACC GCAGCGAAAC GCGCTGGAGC CTCTGATTAC AGAAGCGATT
CAGCGAAGCC AACTGAGCGA AGCCGATGGA GCCCTGCGCC TCAACTGGAG CCGGGGCAGC
ACACCCCAAC GCGGAATCGC ACTGCCGGCT CCAGGGCACC ACCGCTTTTG GCTCACGCTC
CAGGCCTGTG CACCAACGTT TTCAGCCGTC AGCACCATCA CCAGTCGCCA TGAACGCCGC
AATGCTTCCA GCCGCTTGAG CCGATGCAAA ACCTTCGCCT ACGGGCAATC GATCCAGGCA
CGCAGGGAAG CCCAGGACCA AGGGGCCGAA GACGCTCTGC TCTTGAACAC GGCTGGAGCT
CTGTGCTGCG GAACGGCGGC CAATCTGCTG GTCCGGCGAC GCGGACAGTG GCTGACACCG
CCCCTCAGCA GCGGCTGTCT CCCGGGGGTG ATGCGGGGCC GTGCACTCGC CCGAGGCATC
GCGGTGGAAA CCGAGCTGGC GGCCGCGTTC GATGCCGACG ATCAGGCTGT TCTGATCAAC
AGCCTCAGCT GTCGACCGAT CGCATCCCAC AACGGCAAAC CGATGGCGGC AACGTCGACT
GCAGTGGATC TATGGCAATC ACTACTCCAT TGA
 
Protein sequence
MTTSVAWIEG QWGTAASLQL PLDDRALLLA DGLFETVLIR NGGAQLLQEH LQRWSESAAL 
LGMDPPPQRN ALEPLITEAI QRSQLSEADG ALRLNWSRGS TPQRGIALPA PGHHRFWLTL
QACAPTFSAV STITSRHERR NASSRLSRCK TFAYGQSIQA RREAQDQGAE DALLLNTAGA
LCCGTAANLL VRRRGQWLTP PLSSGCLPGV MRGRALARGI AVETELAAAF DADDQAVLIN
SLSCRPIASH NGKPMAATST AVDLWQSLLH