Gene Syncc9605_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2382 
Symbol 
ID3736623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2196368 
End bp2196889 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID637776971 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_382669 
Protein GI78213890 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGCA GCAACCGCAA CGACAACTTC ATTGACAAGA GCTTCACGGT GATGGCGGAC 
CTGATCGTCA AGCTGTTGCC GATCAATGCC CGCTCCAAGG AGGCCTACGT CTATTACCGG
GATGGCCTCT CGGCCCAGAA CGATGGTGAC TACGCCGAAG CGCTGGAGAA CTACGAGGAA
GCCCTGAAGC TTGAGGAGAA CTCCACCGAC CGGAGCGAAA CCCTCAAGAA CATGGCCATC
ATTTACATGT CCAACGGCGA GGAGGAGCGG GCGATCGAGA CTTACCGCAA GGCTCTCGAG
GAAAACCCGA ACCAGCCCTC CTGCCTGAAG AACATGGGGC TGATCTACGA AAAGTGGGGC
CGCATCGCCG AGGAGGGCGG TGAGCAGGAC TCAGCGGATC GCTGGTTTGA CCAGGCCGCT
GATGTCTGGA CCCAGGCCGT GCGCCTCAAT CCCGGCGGTT ACCTCGATAT CGAGAACTGG
CTGAAGTCCA CGGGCCGCAG CAACGTCGAC GTTTACTTCT GA
 
Protein sequence
MPRSNRNDNF IDKSFTVMAD LIVKLLPINA RSKEAYVYYR DGLSAQNDGD YAEALENYEE 
ALKLEENSTD RSETLKNMAI IYMSNGEEER AIETYRKALE ENPNQPSCLK NMGLIYEKWG
RIAEEGGEQD SADRWFDQAA DVWTQAVRLN PGGYLDIENW LKSTGRSNVD VYF