Gene Syncc9605_2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2359 
Symbol 
ID3736505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2169751 
End bp2170920 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID637776947 
Producthypothetical protein 
Protein accessionYP_382646 
Protein GI78213867 
COG category[S] Function unknown 
COG ID[COG4370] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03492] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCCTGCTGCT GAGCAATGGC CACGGTGAAG ACCTCTCCGG CGCCTTACTC 
GCCCAGGAGC TTCAGCGACA GGGGCACAAA GTGCAGGCGC TCCCGCTAGC GGGCCTTGGC
AGCGCTTATC AAAAAGCCGG CGTGCCACTG CTGGGACGCA GCCACGAATT CAGCACCGGG
GGCATTGGCT ACACCAGCCT TCGCGGCCGC CTTACCGAGA TCGCCCAAGG GCAAATGCTG
TATCTGCTGC GTCGCCTGAT CCGTTTGATG CGGCACCGGC GTCGCTTTGA TCTGATCCTG
GTGGTGGGCG ATGTGATCCC TGTGATCGCG GCATGGCTCA GCCAACGCCC TGTGGCGACC
TATCTGGTGG CCTACTCCAG CCACTACGAA GGGACGCTGC GGCTGCCCTG GCCCTGCGCC
GCTCTGTTGA AAAGCCAGCG GTTCAAAGCG GTGTACAGCC GCGATCAACG CACCGCCAAG
GACCTCAGCG GGCAACTGCA ACGGCCGGTG AGCTTCCTGG GCAATCCATT CATGGATTCG
GTGCTCACAG CAGCCGCCCC GCCGCCCAGC AGCATGCCAC GCGTCGGTCT GCTGCCCGGC
AGCCGCCGAC CGGAATTGGA ACAGAACCTG CAGCTCTTGC TGCGGCTGAT CGAGCTGCTG
CCGAGCACAG TGCGCTGCAA CATGGATCTG GCCCTGGTGC CCAGCCTGGA TGACAACAGC
TTGCGGCAGC TCAGCGAACG ATGCGGCTGG CACTTGGAGA ACGGCGTGCT GGAACGTGAG
GGAGCCCGGG CGATCAACGT TCGCCGCGGG GCCTTCCGTG CCGTGCTGCA GCACAGCGAT
CTGGTGATCG GCATGGCAGG TACCGCCATC GAACAGGCCG TTGGCCTGGC CAAACCGGTG
CTGCAGGTGC CGGGCCAAGG GCCTCAATTC ACAGCAGCAT TCGCTGAAGC CCAACGGCGC
CTGCTCGGGC CCACGGTGTT CTGCGCCGAC GGAGAAAGTG GCAGCCGTGA GGCTTTGGAG
AGAACAGCGG AGCTGGCCAT GGCTCTGCTT GAGCGTGCGC GACGGGATCC TGGCTTGCAG
CGGCAATGCC GAGAAGAAGC CAAATGGCGC CTCGGAGAAG CGGGCGGTGG CCTGAGAATG
GCGACAGCGA TCGATGCCCT GCTGCCATGA
 
Protein sequence
MARILLLSNG HGEDLSGALL AQELQRQGHK VQALPLAGLG SAYQKAGVPL LGRSHEFSTG 
GIGYTSLRGR LTEIAQGQML YLLRRLIRLM RHRRRFDLIL VVGDVIPVIA AWLSQRPVAT
YLVAYSSHYE GTLRLPWPCA ALLKSQRFKA VYSRDQRTAK DLSGQLQRPV SFLGNPFMDS
VLTAAAPPPS SMPRVGLLPG SRRPELEQNL QLLLRLIELL PSTVRCNMDL ALVPSLDDNS
LRQLSERCGW HLENGVLERE GARAINVRRG AFRAVLQHSD LVIGMAGTAI EQAVGLAKPV
LQVPGQGPQF TAAFAEAQRR LLGPTVFCAD GESGSREALE RTAELAMALL ERARRDPGLQ
RQCREEAKWR LGEAGGGLRM ATAIDALLP