Gene Syncc9605_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2339 
Symbol 
ID3736692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2153352 
End bp2154575 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content63% 
IMG OID637776926 
Productputative multidrug efflux MFS transporter 
Protein accessionYP_382626 
Protein GI78213847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTTC TCAAACTGCG GCCTGAGCGA CAACGGCAGC TTTTTCTGAT CGCATCCGGT 
GTGAGCACAG CCGGGTCGTT TGCCGGCATC ACCGCCAAGG GCTGGATTCT GATGAAAGGA
GGCGTGGATC CCTTCGTGCT GGCGTTGAAC TTCGCCGCTC TTTCACTGCC CACACTGCTG
GTGAGTGGTC CAGCGGGAGT GCGCACCGAT CGCGTGGGCT GTGAACGGGT TCTGGTTCAA
GCGCAATGGG CACTGCTGGC CGCCTCTGGC CTGGGGGCCC TGGCGATTCC CCTGCTGGAG
GGCACGGCTC AGGTGCTGCT ACTGCTCTGC AGCACCCTTT TGGTGGGCAT CGCCGGAACC
TATGAGATAA CGGCCCGCAA CAAATACTGC TCGATCCTGG TGGAGGAACC CGAAAAGCTG
GCGGGCTATC TCACCAGCTT TTCGGTGGTG TTCAACATGG GCAAGCTGGT GGGCCCTCCG
ATCGGTGGCT GGCTGCTGGC GGCCACTGGC CCGGCCTGGG CCCTGGGCAT TGATGCGGCC
AGCTATCTGC TTCCCATTAG CAGTGTGATG TTGCTGCTCA GCCCAAATCG GGACCGGGAA
GTGCGCAGCA GCGGCGGCGA AGACGCCAGC CTGCGCAACG CCTGGCGCCA CTGCGGCAGC
ACCCTGCAGG GGGTGCTCAG CTTCACCGGG GTTCTCTGTC TGATCGGGTT CTATCACCCG
GGGCTGGCCC CATTGATCGC CTTCGATCAG CTGGGGCCGA AGCCCACGGA TCTGGGTCTG
TTCACCAGCG TGCTGGCAGG CGGCAGCATC GTGGGCGGCC TTGTGCTGCA ACGCAACAGC
CAGCGTTTCT GCCGGCGTCC TTTCCTAACC CTGGGAGGCT TTGGCTTGAT CACCGCCGTG
GCCCAGCTGG GAATGGCCTG CACAACAGGA CCTGGCTTCA GCCTGGCGAT GGCCTTTCTC
ATCGGAGCCG GCACAGCTGG ACTCCTGAGC AGCTGCAACT TGATCAGTCA GATCGGGGCA
CCGCAAGTGA TGCGCGGTCG GATGGCCGGC CTTAGCCAGA TCGCTTTTCT GGGCGGAGGC
GGGCTCAGTG GGTTGATTGT GGCGTTGCTG GTGATGATCA CTAACCTTTC CACGGCTTTC
GTACTCACCG GGGGCCTCAG CGCTGCTGTG GCTGTGCTTT GGATTCGAAA GCGAGGCGCA
AGGATATTGG AACCGCTCAG ATGA
 
Protein sequence
MTLLKLRPER QRQLFLIASG VSTAGSFAGI TAKGWILMKG GVDPFVLALN FAALSLPTLL 
VSGPAGVRTD RVGCERVLVQ AQWALLAASG LGALAIPLLE GTAQVLLLLC STLLVGIAGT
YEITARNKYC SILVEEPEKL AGYLTSFSVV FNMGKLVGPP IGGWLLAATG PAWALGIDAA
SYLLPISSVM LLLSPNRDRE VRSSGGEDAS LRNAWRHCGS TLQGVLSFTG VLCLIGFYHP
GLAPLIAFDQ LGPKPTDLGL FTSVLAGGSI VGGLVLQRNS QRFCRRPFLT LGGFGLITAV
AQLGMACTTG PGFSLAMAFL IGAGTAGLLS SCNLISQIGA PQVMRGRMAG LSQIAFLGGG
GLSGLIVALL VMITNLSTAF VLTGGLSAAV AVLWIRKRGA RILEPLR