| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2330 |
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| Symbol | |
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| ID | 3736683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2142461 |
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| End bp | 2144245 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637776917 |
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| Product | RND family outer membrane efflux protein |
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| Protein accession | YP_382617 |
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| Protein GI | 78213838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGGA TCACCGCGAG TATTTGTCTC GTAGCGGGCG TTGTTTCCTC CGGTATCTCA
CCTGCTCTTG GTCAAGACGC TCCTCAGGTT GAGTCGGCCT CGTTGGACCA ATCCACGCTT
CCGGACGCGA TCGACTTGAA GGGAGCACGG CCCAAGGCCG ATTCCTCGGT CTTAGCTCCA
GCAGTGGATG CTTTGCCTGC ATCCCTCGAA CCGCTGGCTG CCCCCCCCAG CCTTGCCCTT
CCAGATTCGC CGTCTCAGGT GCGCATCCGT GAACTGCGCC CGGTCACCCT GGAAGAAGCC
ATTCAGCTGG CCGAGTTCAA CAGCCCCCAA CTCAAGGCTT CAGCCAGCCA GGTTGATCAG
GCCAAGTCTG CGCTCCGTGC AGCCATTGCT GCTTGGTATC CCACCGTCGA CCTATCGGCC
AGTGGACTTC CCGAATACTT CAAGTCGTAC TCCTACCGAA ATCCAGATTT CGTTCCTGAT
CGGGTCGTTC AGAAACCCAC AGGCCAGATC GACCCCACTA CTGGTGAAGA GATCCTCAGG
CCCGAGACTC GGGATGGGTA CAAAGAACGT TACGGCCGCG AATGGCGTCT CAACGTCGGC
TTGAAGGTGA GTTGGGATTT GATTAATCCC GCACGGGTTC CTCAGATCGC CGCAGCTCGT
GATCAATTTG AAAGGGCGCG AGAGTCTTAC CTGATTGCCT TACGTGATCT TCGTTTGGAG
ACCTCGACGG CCTATTTCGA TTTGCAGGAA GCAGATGAAG GTGTGCGTAT TGGTCAGGCT
TCTGTCAAAG CGTCACTGGT CAGCCTCCGT GATGCACGGG CTCGCTTCAA CGCGGGGGTT
AATACCAAGT TGGAAGTTTT GGAGGCTGAG ACTCAACTGG CCCGTGACCG CAATCTGCTG
ACGACCAATC TCGGTCAACA ATCAGTGTCG CGTCGCAACC TCGCTGTCGT ACTCGACCTC
CCCCAGGACG TCACTCCCAC GGCGGCAACG CCTGCGCGAC CTTTGGGCTT GTGGACCCCA
TCACTTCAAG AAAGCATCGT TGCGGCTTAC AACTATCGCG AGGAGCTCGA TCAACTGATC
CTCGATATAT CGATCAACCA CAGCCAGGCG AATGCGTCTT TAGCTGCTGT TCAGCCTGTG
CTCAGTTTCG TGAATTCCAC CACGACCTCC CGTACCCAAG GCCAAACCGG GCAGACGTCG
AGCGACATTG ATATGGGCGA CTTCACCTAT GGCATTCAGA ACAGCATGGC GTTGACGGCG
AATTGGCGGT TGTTTGATGG TGGTCGCGCC AGGGCCGAAT ACCGGCGTTC CAAGCAGGCC
TCTGAAGAGA GCCGGTTCAA TTTCGCGAGA ACCCGTGATC AGATCCGGCT TGAGGTTGAG
CAAAGCTTTT TTGATCTGCG AACAGCTATC CAGAACATCG ACACCACATC GAGCGAAGTC
CTCTCATCGC GGGAATCCCT GCGCTTGTCA CAACTGCGGG TTCAGGCCGG CGTTAGCACC
CAACGGGAAG TGGTCGATAA CCAGCGCGAT CTCACCAACG CCGAGCTTCG CTATACGGGT
GCCATCAAGG CCTACAACAC GAGCCTGGCG CAGCTGAGAC GTCGAACAGG ATTGGATGCT
CTTGTGTCCT GTAATGCGGT TTCACTGCCG GCCACCAACC AGGAACTTGA ACAACCGTTT
ATTCCGATTG AGCCCACGCC GCTTAAGACC GCTTGCCCAT CGGTGGCTAC CGCAGGTTCA
TCGATGAACC AAAATCAGGA CAGTCCTGTT CAACCTCTGT GGTGA
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| Protein sequence | MRRITASICL VAGVVSSGIS PALGQDAPQV ESASLDQSTL PDAIDLKGAR PKADSSVLAP
AVDALPASLE PLAAPPSLAL PDSPSQVRIR ELRPVTLEEA IQLAEFNSPQ LKASASQVDQ
AKSALRAAIA AWYPTVDLSA SGLPEYFKSY SYRNPDFVPD RVVQKPTGQI DPTTGEEILR
PETRDGYKER YGREWRLNVG LKVSWDLINP ARVPQIAAAR DQFERARESY LIALRDLRLE
TSTAYFDLQE ADEGVRIGQA SVKASLVSLR DARARFNAGV NTKLEVLEAE TQLARDRNLL
TTNLGQQSVS RRNLAVVLDL PQDVTPTAAT PARPLGLWTP SLQESIVAAY NYREELDQLI
LDISINHSQA NASLAAVQPV LSFVNSTTTS RTQGQTGQTS SDIDMGDFTY GIQNSMALTA
NWRLFDGGRA RAEYRRSKQA SEESRFNFAR TRDQIRLEVE QSFFDLRTAI QNIDTTSSEV
LSSRESLRLS QLRVQAGVST QREVVDNQRD LTNAELRYTG AIKAYNTSLA QLRRRTGLDA
LVSCNAVSLP ATNQELEQPF IPIEPTPLKT ACPSVATAGS SMNQNQDSPV QPLW
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