Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2304 |
Symbol | |
ID | 3737775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2110344 |
End bp | 2112509 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637776886 |
Product | recombination factor protein RarA/unknown domain fusion protein |
Protein accession | YP_382591 |
Protein GI | 78213812 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.320416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCCAGG ACCTCTTCGC TTTTCACGGT GAGCAGCAAC GGAGGCGGCT TGCTCCTTTG GCAGACCGCA TGCGTCCGCG CACGCTGGAG GAATTTGAGG GCCAGAGCGG GATCCTGGCC GACGGACGGC TCCTACGCCG TGCCATCAAG GCTGATCGAG TCGGCAACCT GATCCTGCAT GGCCCGCCCG GGGTCGGCAA AACCACCTTG GCGCGGATCA TCGCCAACCA CACCCGAGCT CATTTCAGCA GCCTCAATGC CGTGCTGGCG GGCGTCAAAA ACTTACGGAC CGAGGTGGAT GCTGCACGCC AACGTCTTGA ACGGCATGGC CTGCGCACGA TCCTATTCAT CGACGAAGTG CACCGCTTCA ACAGCGCCCA GCAGGATGCG CTGTTGCCAT GGGTGGAGAA CGGCACCGTC ACCCTGATCG GCGCCACCAC AGAAAACCCC TATTTCGAAG TCAACAAGGC GCTGGTCAGC CGCTCGCGGT TGTTTCGTTT ACTGCCTCTG GAACCAGAGG ATTTACAGCG GCTGCTGCAA CGCGCCCTTG CAGACAACGA GCGGGGCTAC GGCGACCGTG CCATCGCCAT CAGCAGCGAT GCCGCCAACC ACCTCGTTGA TGTAGCGGGC GGCGACGCTC GCAGCCTGCT CAATGCCCTG GAACTGGCGG TGGAGAGTTC CGAACCCGAT GGCGACGGTG TGATTCAGAT CAACCTGGCC ATCGCCGAGG AATCGATTCA GCAGCGAGCT GTGCTCTACG ACAAGCACGG CGATGCCCAC TACGACACGA TCAGCGCCTT CATCAAATCG CTGCGGGGCT CCGATTCCGA TGCGGCGCTG TTCTGGCTGG CACGCATGGT GGAAGCCGGT GAAAACCCCC GCTTCATTTT TCGGCGGATG TTGATCGCAG CGGGCGAAGA CATCGGCCTG GCCGACCCGC AGGCCATCGT TGTAGTGGAA GCCTGTGCCG CGGCCTTCGA ACGGGTAGGG CTGCCCGAGG GGCTTTATCC CTTGGCCCAA GCCGCGTTGT ACCTGGCGAG CACAGAAAAG AGCAACAGCG TTCTGGGCTT CTTTGATGCC CTCAAAACCG TGCGCGATGC GCAGAAACAA GACGTGCCCG GGCATTTGCG CGATGCCAAC CGGGATGGAG CCGCCTTCGG CGATGGCGTG GGCTACCGCT ATCCCCATGC CTACGCCGAA CACTGGGTAG AGCAGCAATA CCTCCCCACA GCCCTGCAAG GCGAGGTGTT CTGGCAGCCC GGAGAACTCG GGTGGGAGGG GGAACGTCGC CAGCGGATGG CGGAACGCCG GGCAGCCCAA CTCGCCGCGG CCGCTGAGCT GGCGGCCGAC CAGCCTTTGC TGTTGAGCAG CGGACCCGAA CGTCCTGGCG TGGACCGCTG GGTGCAGCGC CAATTGGGGC AGGAAGGAGA ACGGCTGCAG CGCCTGCGCG AGCGGCTCTG GCGAGAGATC CCCTGGACCC GTCGAGATCG GGTGCTGCTG CTGGGGATGC GGTCGCTGAT CTGGGCTCTC GATCCATTGA GGGCTGCCCC GGAGGGAGGC GTCACCATGC TCTGCGACAA CGATGCCGAC CGCAGCCGGC TGGAAGCGCA GATGGATTTG CTCGAGCCGG AGCATCGGCC CGACCTGTTG ACCGGCAGCC TCGATGCTCT GCCACCGAGC CAAGCCTTCG ACTGGATCGG AGGACGGCTC GCCGCTGCCG ATCTGCAAGG TCAGAACTGG ACGGCGCTGC TGAAAACAAT CAACCAACAT GCCGAGCCGA AAACGGGCTT ACGGCTGCTG ATCAGCCGCG CCGAACTGGG GCCCGCCGGT GCATTGCTGC AAGACGACGA TCCAACAGAA CTGTTCAGCG ATCTTGTGGC TCAAGAACAA CAGTGGCTTG AGCGGCAGCA GCGGCCAGAA GAGTTATTGA AGAAGGCTGG CTGGCAGCTC CGTTGTGAGG AGTGGCTTGA ACATCTCACT CTTCCAGGGG GCACGGAACT GGCTGAGCGA TGGCTGGCCG AAGGGTCGCC CTACCGGCAG GCCATGGGGG AGATCAGCAC GGAAGTGCTG ACGCAGTTGC GCCAATCGTT GAACGGCCTG GGCGAAGGTG GTTTAAGGCT GCCAATGCGC CATCAGCTGA TCCAAGGCGA GCGAGGCACG CCATAA
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Protein sequence | MGQDLFAFHG EQQRRRLAPL ADRMRPRTLE EFEGQSGILA DGRLLRRAIK ADRVGNLILH GPPGVGKTTL ARIIANHTRA HFSSLNAVLA GVKNLRTEVD AARQRLERHG LRTILFIDEV HRFNSAQQDA LLPWVENGTV TLIGATTENP YFEVNKALVS RSRLFRLLPL EPEDLQRLLQ RALADNERGY GDRAIAISSD AANHLVDVAG GDARSLLNAL ELAVESSEPD GDGVIQINLA IAEESIQQRA VLYDKHGDAH YDTISAFIKS LRGSDSDAAL FWLARMVEAG ENPRFIFRRM LIAAGEDIGL ADPQAIVVVE ACAAAFERVG LPEGLYPLAQ AALYLASTEK SNSVLGFFDA LKTVRDAQKQ DVPGHLRDAN RDGAAFGDGV GYRYPHAYAE HWVEQQYLPT ALQGEVFWQP GELGWEGERR QRMAERRAAQ LAAAAELAAD QPLLLSSGPE RPGVDRWVQR QLGQEGERLQ RLRERLWREI PWTRRDRVLL LGMRSLIWAL DPLRAAPEGG VTMLCDNDAD RSRLEAQMDL LEPEHRPDLL TGSLDALPPS QAFDWIGGRL AAADLQGQNW TALLKTINQH AEPKTGLRLL ISRAELGPAG ALLQDDDPTE LFSDLVAQEQ QWLERQQRPE ELLKKAGWQL RCEEWLEHLT LPGGTELAER WLAEGSPYRQ AMGEISTEVL TQLRQSLNGL GEGGLRLPMR HQLIQGERGT P
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