| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2119 |
|---|
| Symbol | |
|---|
| ID | 3737740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1939900 |
|---|
| End bp | 1942110 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637776706 |
|---|
| Product | outer envelope membrane protein-like |
|---|
| Protein accession | YP_382413 |
|---|
| Protein GI | 78213634 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGGCTTC GGCCAGCCTG CGCCTCGATG ACCCGCCGTT CGTCCCGCCG CTCCTCGGTT
GCAGTACGTC GCACGGTTTT GGGCCTGATG CTGGGAATTC CCCTGGTGGC TCCACCAGTG
ATGGCGCAGG ACGCAACGCC TGCAGACCAA CCCCTCGAGG GGGGAGAGGT CATGGTGGAC
GACACCTTGG TTGAACAGCC CCGGGTTCTG ATTTCTGAGG TGCTGATTGA AGGCATCGAT
GGCCACCCTG AAGAGGAACG TCTTCAGATC TCCACCTACG ACGCCATGCA GGTGCGTCCA
GGGATGCGTG TCACCCGCGA GGAGCTTCAG AACGACCTGA ATGGCATTCA GGCCACGGGC
TGGTTCTCGG ATGTGCGCAT CGTTCCCCAG AACGGACCGC TGGGCGTTCA GGTGGTTGTT
CAGGTGGAGC CCTTCCCTCC CTTAAGTGCA GTGGAGATCA GCGGCGACGA TGAAAATCTC
CTTTCGGATG TGGTGATTGA GGAGACGTTT GCTTCCGATT ACGGGCGCAC GCTGAACCTC
AACGATCTGC AGCAGCGGAT GAAGGCTCTC CAGGCTTCAG TGGCCGGTCA GGGCTATTCC
CTGGCACGGG TGTCCGGTCC GGAACGGGTC AGCCCTGAGG GTGTGGTCAC GCTCAAACTG
CTGCAGGGCA GCGTGTCTGA CGTTGAGGTC AAATTCCTCA CCAAAGAGGG TGATGACACT
GATGAGAACG GCAATCCCAT CCGCGGCAAG ACCAAGGAGT GGGTGATCAC CCGAGAGGTT
TCGATCCAAC CCGGCGATCC GTTTAACCGC AATGCCCTTG AGCGGGACAT CAAACGGCTC
TACGCCACCC AATTGTTCAG TGATGTCAAG GTGACTCTGC GGCCTGTGCC GGAAGAGCCT
GGCGATGTGG TGATCGTGCT TGGCATCGTC GAGCAGTCCA CCGGTCAGCT CTCAGGCGGT
CTCGGCTACA GCCAGAGCCA GGGTGTTTTC GGTCAGGTGC AGCTGCAGGA AAGCAATCTT
TTCGGCCGAG CCTGGAATCT GGGCACCAAC ATCACCTACG GCCAATACGG CGGACTGGCC
AACCTCAACT TCACGGATCC CTGGATCTAC GGCGACAAGC ACCGCACCAG CTTCCGCACC
TCTGTGTTCT TGAGCCAGCA GGTGCCCCAG GTTTTCCAAA GCGAAGACAA CGGCAACATC
CGCACCGCGA AGGACTACGC CGACAACGGC TCCAACAAGG CCTACGAGAC CGGTCGTAAA
TACGGGTTCA CCGATGGAGA CAAGGCTCCA GGCGAGGTCA ACAAGGCCGA CAGTGAGTAC
CCCAACCGCA GCTGGTTCGA CTACGAGGGT GACACGGTTG TGCTTCGCAA GGTTGGCGGC
AACTTCTCCT TCTCACGCCC CCTGAATGGT GGTGATCCTT ATAAGGACAG CAAGTGGAAT
GTCCTGGCTG GGATGTCCTT CGCCGAAGTG CGGCCAATCA ACTTTGCCGG TGACACGAGG
CCCTATGGCG TGTCCAACAA CAAATTCCGC AAGGGCAAGG TCAACAAAGA CGACGTCATC
TGTGTGTCCT ACAACTGCGC CGACACCAAC ACCCTGGTGG GGATGCGTTT CGCCACCACC
TACAACAACT TCAACAACCC CCGCAATCCA ACCAGCGGCA ACTTCTTCAC CGCCGGAACC
GAGCAGTTTC TCGGCATCAA CAATGATTCG CCCACCTTCA ACCGTCTGAG GGCCAGCTAC
ACCCAGTTCT TCCCGGTGGA TTGGCTGAAG ATCCACAAGG GTTGCCGTCC CAAGGCCGGT
GAGCAGGCCG ATTGCCCGCA GGCCATTGGC GTGCAAATCA AAGGTGGCGC GATTATGGGT
GTAGCGCCCC CGTACGAGGC GTTCTGTATG GGTGGATCCA ATTCGATTCG GGGTTGGTAC
GACTGTGATA TGGCGGTGTC CACGGCTTTT AGCGAACTCA CGATCGAGTA CCGCTTCCCG
TTGATCAGCA TCTTTTCTGG CGAGGTGTTC ATGGATTCCG GCACCGATTT CGGCACTCAG
AAGAATGTGC CTGGCAAGCC TGGCTTGCTG TTGGATAAAG ACGGATCCGG TGTTTCTTTC
GGTACCGGTG TGATCGTGAC CACGCCGGTT GGTCCGATCC GGGTTGAGGT GGCCACGAAA
GACTTCAGCT CTGATTACCG CTTCAACCTG GGCGTGGGCT GGAAGTTTTA G
|
|---|
| Protein sequence | MWLRPACASM TRRSSRRSSV AVRRTVLGLM LGIPLVAPPV MAQDATPADQ PLEGGEVMVD
DTLVEQPRVL ISEVLIEGID GHPEEERLQI STYDAMQVRP GMRVTREELQ NDLNGIQATG
WFSDVRIVPQ NGPLGVQVVV QVEPFPPLSA VEISGDDENL LSDVVIEETF ASDYGRTLNL
NDLQQRMKAL QASVAGQGYS LARVSGPERV SPEGVVTLKL LQGSVSDVEV KFLTKEGDDT
DENGNPIRGK TKEWVITREV SIQPGDPFNR NALERDIKRL YATQLFSDVK VTLRPVPEEP
GDVVIVLGIV EQSTGQLSGG LGYSQSQGVF GQVQLQESNL FGRAWNLGTN ITYGQYGGLA
NLNFTDPWIY GDKHRTSFRT SVFLSQQVPQ VFQSEDNGNI RTAKDYADNG SNKAYETGRK
YGFTDGDKAP GEVNKADSEY PNRSWFDYEG DTVVLRKVGG NFSFSRPLNG GDPYKDSKWN
VLAGMSFAEV RPINFAGDTR PYGVSNNKFR KGKVNKDDVI CVSYNCADTN TLVGMRFATT
YNNFNNPRNP TSGNFFTAGT EQFLGINNDS PTFNRLRASY TQFFPVDWLK IHKGCRPKAG
EQADCPQAIG VQIKGGAIMG VAPPYEAFCM GGSNSIRGWY DCDMAVSTAF SELTIEYRFP
LISIFSGEVF MDSGTDFGTQ KNVPGKPGLL LDKDGSGVSF GTGVIVTTPV GPIRVEVATK
DFSSDYRFNL GVGWKF
|
|---|
| |