| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2115 |
|---|
| Symbol | lpxB |
|---|
| ID | 3737736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1936610 |
|---|
| End bp | 1937791 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637776702 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_382409 |
|---|
| Protein GI | 78213630 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.895943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGGC TGCTGATCAG CACCGGAGAG GTTTCCGGTG ATCTGCAGGG CAGCCTGTTG
ATTCGCGCCT TGCGGTTGGA GGCGGAACGA CGGGGGCTCG AGTTGGAGCT GCTGGCCCTG
GGTGGCCCGC GCATGGAGGC GGCGGGTGCA GCATTGATCG CCGACACCGC GCCGATGGGA
GCCATCGGCC TGTGGGAGGC CGTTCCGTTG ATTCTTCCCA CGCTGCGGCT GCAGGCCCGG
GTGGATGCGC TGTTGGCGGA ACATTCCCTT GATGGGGTAG TGCTGATCGA CTACGTCGGG
GCCAATGTGC GCTTGGGCAC TCGGCTGCGG CGCCAGCAAC CCGAGCTGCC GATCACGTAC
TACATCGCCC CCCAGGAGTG GGCTTGGCGT TTCGGCGATG GAAGCACCAC CCGTCTGCTT
GGCTTCACCG ACAAGATCCT GGCGATTTTC CCGGCGGAGG CCGAGTTTTA TGCCGCCCGT
GGTGCGGATG TGAGCTGGGT GGGTCATCCG TTGCTGGACA GCTTCCAGAA CCTGCCCGAT
CGCGCCAGAT CCCGTCGCCA ACTGGGTCTG GATCCAGAGG CCCCGGTGCT GTTGCTGCTG
CCAGCCTCGC GGCCCCAGGA GTTGCGCTAT CTGATGCCAC CTCTGGCCCA GGCGGCTGCT
CTGTTGCAGC AACGCCACCC TGATCTTCAG GTGCTTCTGC CCGCTGGGCT TGCGGCGTTC
GAAGCGCCCC TGGCTGCGGC GCTGCAGGAG GCCGGGGTCC GTCATGGGCG GGTGATTCCC
GCCGCTGAAG CGGATGGGCT GAAGACCACC CTCTGTGCAG CGGCGGATCT TGCCTTGGGC
AAATCCGGCA CGGTGAACCT GGAACTGGCC CTGCAGGGGG TTCCCCAGGT GGTCGGTTAC
CGCGTCAGCC GACTGACGGC CTGGGTTGCC TGCCACGTGC TGCGCTTCCA GGTGGACCAC
ATCTCCCCGG TGAATCTGTT GCTCAAGCAG CGGTTGGTGC CGGAGCTGCT GCAGGATGAA
CTCACGGCTG AGGCCCTGGT GGAGAGGGCG CTCCCCTTGT TGACCGCCAC CCCTGAGCGC
CACGCCATGC TGGAGGGGTA TGACCGACTG CGGGCCACCC TGGGGGCTCC TGGGGTCACC
GAGCGGGCGG CCAAGGCCAT CTTTGATCAG GTGATCGATT GA
|
|---|
| Protein sequence | MVRLLISTGE VSGDLQGSLL IRALRLEAER RGLELELLAL GGPRMEAAGA ALIADTAPMG
AIGLWEAVPL ILPTLRLQAR VDALLAEHSL DGVVLIDYVG ANVRLGTRLR RQQPELPITY
YIAPQEWAWR FGDGSTTRLL GFTDKILAIF PAEAEFYAAR GADVSWVGHP LLDSFQNLPD
RARSRRQLGL DPEAPVLLLL PASRPQELRY LMPPLAQAAA LLQQRHPDLQ VLLPAGLAAF
EAPLAAALQE AGVRHGRVIP AAEADGLKTT LCAAADLALG KSGTVNLELA LQGVPQVVGY
RVSRLTAWVA CHVLRFQVDH ISPVNLLLKQ RLVPELLQDE LTAEALVERA LPLLTATPER
HAMLEGYDRL RATLGAPGVT ERAAKAIFDQ VID
|
|---|
| |