| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2094 |
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| Symbol | |
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| ID | 3736281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1917582 |
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| End bp | 1919687 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637776681 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_382389 |
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| Protein GI | 78213610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.159475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC GGGCTTTGAG TGGCATTCAC CCCGGTTCTC CCTGGCCCCT GGGCAGCAGC
CTCACCAGGC GGGGGGTGAA TTTCGTGCTG GCGGCCCCCG GGGCCGACCG GATTGAGTTG
CTGCTCTACA GCAACAGCAA TGACCGCAGC CCGGAACGGG TGATCGAACT GGATGTTCGA
CGTCACCGCT CGGGCAACTA CTGGCACGTG GAGGTGGAAG GAGTCGGCGA AGGCTGCTGT
TACGGCTACC GCGTCTTCGG GCCACTGGCA CCAGGGGGCC ATGGCTTCCG CCCCTCCAAG
GTGTTGCTCG ACCCCGCCGC CCGCGCCATT AGCGGCTGGG ACGTCTACGA CCGGGTGCTG
GCCACCGGCC TCTCACCCAA TGCCCATACC TGCCTCAAGG CGGTGGTGTG CGAACGGGAT
CTGTTTGATT TCCAGGCCCA TCCGCGCCCA CGCCACAGCT GGCAACGCAC GGTGATCTAC
GAGCTGCACG TGGGGGGCTT CACCCGCCGC GAGGATGCGG GCGTTGCCGC AGCGAACCGG
GGCACATACC TCGGGCTGAT TGAGAAGCTG CCCTACCTCA AGGAACTGGG CATCACGGCA
GTGGAGCTGT TGCCGGTGTT CTGCTTCGAT CCGGCCGATG CCCCCCCTGG GCGCGACAAC
GTGTGGGGTT ACAGCCCCCT GAGCTGGTTC ACACCCCACC ACGGCTACTG CAGCAGTAGC
AATCCGCTGC AGGCCCGCCA TGAGGTGCGC CAACTGGTGG CCGCCTGCCA TGACGCCGGC
ATCGAAGTGC TGCTGGATGT GGTCTACAAC CACACCACGG AAGGCAACCG CCATGGCCCC
ACGTTGAGCT GGCGTGGCTG TGCTGATGAC GTCTACTACC ACCAGAACGA CGACGGCGAT
TATCTGGATG TGAGCGGCTG CGGCAACTCG ATCGCCGCTA ACGCGCCGAT CAGCACCCAG
TTGATCCTCG AATCAATGCG GTGCTGGGCC CTGGAGCTGG GGGTGGATGG CTTCCGCTTC
GACCTGGGCA TCGCCCTGAG CCGCGGCAAT CAACTCAAAC CCCTCAACGA CCCGCCCCTG
TTCACGGCGA TGGGGGCCGA CCCGCAGCTG AGCGACCTCA AACTGGTGAG CGAACCGTGG
GATTGCGGCG GCCTCTATCG GCTAGAGGAT TTCCCCGCCA AGCGGATCGG CACCTGGAAC
GGCCATTTCC GCGACGGCAT GCGGCGTTTC TGGAAGGGTG ACGACCACAG CACCTGGACC
CTGGCCCAGC GGTTCAAAGG CAGCCCTGAT CTCTATGACG GCAAGCCCGT AGCCCTGGGG
CGTTCGGTGA ATTTCATCAC CGCCCATGAC GGCTTCACCC TGGCGGATCT GGTGAGCTAC
AACCGCAAAC ACAACCTGGC CAACGGCGAA GACAACCGCG ACGGCGAGAA CCACAACAAC
AGCTGGAACC ACGGCATCGA AGGCCCTAGC AGCAATCCCC TGGTGCAGAC CCTGCGGCGC
CGGCAGCAAC GCAACCTGCT CAGCTCACTG CTGCTGGCCC GCGGGGTGCC GATGCTGCTG
ATGGGCGATG AAGTGGGCCG CAGCCAGGGA GGCAACAACA ACAGCTGGTG CCAGAACAGT
CCGCTGGGGT GGATGGTCTG GGATGAAGAC CACTGCGACC TGGAACTCAA GCTGTTTCTG
CAGCGGCTGC TGCGGCTGCG CCAGGCCCTG CCGCAGCTGT TCAATCCGCT GGTGCCGCCA
CGGGAAAGCA ACCGCAAATC AGCACCACAG CCATCCGAAC AGCGGAGCGA TCTCTGGCGG
CAATGGCACG GCGTGAGCCT GGCCAAACCC GACTGGGCGG CCTGGAGCCG CACCACGGCC
ACCAGCCTCC ACAGCGGCAG CCGCGGTGCT CTGCTCTGGA TGGGCTTCAA CGCTTACAAG
GAAAGTCTCA GCTTTGAATT GCCGATTCCG GCATCCCCCT GGAAGCGGGT GATCGACACC
TCGTTGCCCA GCCCCCAGGA TTTTCCTGCT GAGCCGGTGA ACTTCAGCTG CATGGAGATA
CCTCTGCAAA GTCGGAGCTT CGTGCTGCTG CTTGCCGAAG AGGAAATCTC AGGCCTTCGG
TTGTAA
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| Protein sequence | MPQRALSGIH PGSPWPLGSS LTRRGVNFVL AAPGADRIEL LLYSNSNDRS PERVIELDVR
RHRSGNYWHV EVEGVGEGCC YGYRVFGPLA PGGHGFRPSK VLLDPAARAI SGWDVYDRVL
ATGLSPNAHT CLKAVVCERD LFDFQAHPRP RHSWQRTVIY ELHVGGFTRR EDAGVAAANR
GTYLGLIEKL PYLKELGITA VELLPVFCFD PADAPPGRDN VWGYSPLSWF TPHHGYCSSS
NPLQARHEVR QLVAACHDAG IEVLLDVVYN HTTEGNRHGP TLSWRGCADD VYYHQNDDGD
YLDVSGCGNS IAANAPISTQ LILESMRCWA LELGVDGFRF DLGIALSRGN QLKPLNDPPL
FTAMGADPQL SDLKLVSEPW DCGGLYRLED FPAKRIGTWN GHFRDGMRRF WKGDDHSTWT
LAQRFKGSPD LYDGKPVALG RSVNFITAHD GFTLADLVSY NRKHNLANGE DNRDGENHNN
SWNHGIEGPS SNPLVQTLRR RQQRNLLSSL LLARGVPMLL MGDEVGRSQG GNNNSWCQNS
PLGWMVWDED HCDLELKLFL QRLLRLRQAL PQLFNPLVPP RESNRKSAPQ PSEQRSDLWR
QWHGVSLAKP DWAAWSRTTA TSLHSGSRGA LLWMGFNAYK ESLSFELPIP ASPWKRVIDT
SLPSPQDFPA EPVNFSCMEI PLQSRSFVLL LAEEEISGLR L
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