Gene Syncc9605_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2080 
Symbol 
ID3735811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1902041 
End bp1902319 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content63% 
IMG OID637776666 
Producthypothetical protein 
Protein accessionYP_382375 
Protein GI78213596 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.567469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC GCCCCGTCCT GCGTCGCTGC GTGGCCTGCC GCCAGCTCTT GGATCGCCGC 
CAACTCTGGA GGGTGATCCG CGACCATCAG GACGGAGTTC GCCTCGATGA GGGGATGGGC
CGTTCGGCCT ATCTCTGCCG CGAGGAGAAC TGCCTTCAGG AGGCGACCCG TCGCAAACGC
CTGCAGAAAG CCCTGCGTTG TCAGGTGCCC GAAACAGTGC TTGCGGTGTT GAAACAGCGG
CTTAACCAAA GCGTTGGTGA ATCCGCTGAG GCAGACTGA
 
Protein sequence
MSDRPVLRRC VACRQLLDRR QLWRVIRDHQ DGVRLDEGMG RSAYLCREEN CLQEATRRKR 
LQKALRCQVP ETVLAVLKQR LNQSVGESAE AD