| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2060 |
|---|
| Symbol | |
|---|
| ID | 3735711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1878430 |
|---|
| End bp | 1879242 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637776646 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_382355 |
|---|
| Protein GI | 78213576 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.156934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG ATCGCAGCCA ACAGAAGGAC CAGGGGCTGT CCAGCCTTTC CGTGGATCCT
GATCTGCTGG CGCGTGAGCT GGCGGCGGAA GATGACGTTG ATCCGCTTGA TGCGATTCAG
CTCGATGACG CCGAGCAAGA TTCCTCTCTG AAGATTGCCC GGGCCTGTGA CCAGGGCCTG
GTCTGGTTGC GTGGCAACCA TGGAGAACGG CTGCAGGGCC TGCAGGTGTT CTGTGAACAC
CGTGATCCCC GGTCGATTGC CCTGCTGCTG CCCTTGCTCC AGAACTCCTG TCCGGTGGAG
CGGATGAGTG CCGTTTACGC CTTGGGCCGC AATCCATCGC CGCCGGCTGT TGAGCCGCTG
TTGCGGCTGC TGCAGCTCGA TGCCAATGCC TACGTCCGCA AGGCTGCGGC CTGGAGCCTG
GGCAATTTCC CCGATGCTCC GGTGCTCAAT CCGTTGATCC GGGCGCTGCA GACGGATGTC
GCAGCGGTGC GCCTCTGGTG TCCAGGTTCC CTGGCGGAAG CCGGCAGCCG TTCCCCGGTC
AAGGCCGACC CCGCGGCGGG GCAATTGCTG GTGAGTCTGC GCATCGACAG TGAAGCGGTG
GTGCGCAGCA ACTGCATCTG GGCTTTGGGC CGTTTGATGG ATCAGCTGGT GCAGCCGCGG
CAAGCCGAGA TCGTTGAAGC CCTGGTGAGT GCCTTACTCC ATGACGGGGA GATCTCCGTG
CGCGATGAGG CCAGAACGGC CCTCGAGCAG CTGGAGGATC CGCTGGTGCT GGAACGCCTG
CAGGCGTTGA TCAACGACGG TTTTATCCTG TAA
|
|---|
| Protein sequence | MTDDRSQQKD QGLSSLSVDP DLLARELAAE DDVDPLDAIQ LDDAEQDSSL KIARACDQGL
VWLRGNHGER LQGLQVFCEH RDPRSIALLL PLLQNSCPVE RMSAVYALGR NPSPPAVEPL
LRLLQLDANA YVRKAAAWSL GNFPDAPVLN PLIRALQTDV AAVRLWCPGS LAEAGSRSPV
KADPAAGQLL VSLRIDSEAV VRSNCIWALG RLMDQLVQPR QAEIVEALVS ALLHDGEISV
RDEARTALEQ LEDPLVLERL QALINDGFIL
|
|---|
| |