Gene Syncc9605_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2018 
Symbol 
ID3736647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1838091 
End bp1838609 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID637776604 
Producthypothetical protein 
Protein accessionYP_382314 
Protein GI78213535 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.568295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCG ATTGGGGCTT CAGTTGGGGC GGCTGGTTGG ACAACCGCCG CGGTGAGTGG 
TGGCTGCTGG CCCAGCTGCT GCTGATCACG GCCCATCTGC TTCCGGTCTG GCCTGCTCCG
GCCAGCTTCG GTGTGGCGAT TTGGCCTAAA TCCTTGTTTG GGCTGGGCCT GCTGCTGTTG
GCTTTTGGCC TGTTTCGGGC CCTTGAGGCG TTTCGCTGTC TCGGGGCCAG TCTTTCGCCG
CTGCCGGCGC CCAAGCCGGC GAATCAGTTG ATCGCCACAG GCACATATGC CATCTGCCGG
CATCCCTTGT ACCGGTCGGT GCTGCTGTGT TCCGCAGGCG TGGTGTTGGC CACAGGCAGC
CCGCTGCATC TGTTGCTGTT GGTCAGCCTG GCGGCCGTGC TGCGGGGGAA AGCCCGCTTC
GAGGAGCAGG GGTTACGGGC GCTGCATCCG GATTACGGCC AATACGCCGC TGTCACCCCG
GCGATTGTGG GCTGGGTTCC TGGATTGGAC TGGCGCTGA
 
Protein sequence
MFSDWGFSWG GWLDNRRGEW WLLAQLLLIT AHLLPVWPAP ASFGVAIWPK SLFGLGLLLL 
AFGLFRALEA FRCLGASLSP LPAPKPANQL IATGTYAICR HPLYRSVLLC SAGVVLATGS
PLHLLLLVSL AAVLRGKARF EEQGLRALHP DYGQYAAVTP AIVGWVPGLD WR