Gene Syncc9605_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2005 
Symbol 
ID3737453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand- 
Start bp1824883 
End bp1825545 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID637776591 
Productmembrane protein-like 
Protein accessionYP_382301 
Protein GI78213522 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.598489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.486112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAC GTTATTTATC TGATAGCTAT CGACTTACAC GCGCCTTTTT AGTCGGAACT 
CTTTCAACTG TTGTACTCTT GCCACTTCTC TCCGTAAGGG AAACCTTAAC GGTCGCGATT 
TCTCTGGCTT TGACATGTGA TTTGCTTATC TTTTTACGCA GAACATGGCT ACTTAGTACT 
GCCCGTACTA GAGAAATTCT TTCATGTTCT GAAGCCAGAG AGTCATTGGT AGCAGAAAGA 
ACCATTGCTT TGGTTTTTCT CAGTCTTGGA ATGTTGAGCT TTTGTCTTAC AGAGCTCCAT 
TCGCCCCAGG ATGCATTGCC AAACCGCGTT CATATTTTTA CTGCGTTTTT AGCTTTGTTC 
TTGATGTGGT TGGAGCTGCA CAATGGTTTC GCTCTTTATT ATGCCAAAAG GTATTACGAG 
ATGAATCCTA CTCCGCTAGC TGCTGATGAT ACGCAACATG GATTTATTTT TGAAGGGAAT 
GAGCCATCAT TTAGTGATTT TCTGTACATC TCTTATTCGA TCGGTTTGAC ATATTCGATG 
ACTGATTGTG GCTTAGAGGA TGCATCCGTA CGTCGTATTG TTCTTGTTCA TTGTCTTTCA 
TCGTTCCTTT TTGCATCGAC AATATTTTCA ATTATTCTGT CTCTTGTTAC ACAGGTTGCC 
TAA
 
Protein sequence
MRLRYLSDSY RLTRAFLVGT LSTVVLLPLL SVRETLTVAI SLALTCDLLI FLRRTWLLST 
ARTREILSCS EARESLVAER TIALVFLSLG MLSFCLTELH SPQDALPNRV HIFTAFLALF 
LMWLELHNGF ALYYAKRYYE MNPTPLAADD TQHGFIFEGN EPSFSDFLYI SYSIGLTYSM 
TDCGLEDASV RRIVLVHCLS SFLFASTIFS IILSLVTQVA