Gene Syncc9605_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1979 
Symbol 
ID3736376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1799305 
End bp1800612 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content64% 
IMG OID637776564 
Producthypothetical protein 
Protein accessionYP_382275 
Protein GI78213496 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0799081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCAG GCCCAGGGGC AGGCAAAACC CTCGGGGCCA TGCTGGGATT CCGCGCCATG 
CGCGATCAGG GCCGGCTGGA CCATTTCGTG GTCTTCTGCC ACCGAACCTC AATCCTCAAC
CAGTGGAAAT CCGCCGCAGC GCGTCTTGGC TTGCAGCTGG AGGAGTGGTC CTGCCCGCCG
GAGCAAAGCC AAGACGCTGA TGGCTTGTTG GTGACTTATC AGGGGGCCGG TCGCCAGCTC
GAGGCTCTGG GTGCACGGCT CGAGCAATGG GGCCTGAGCG CCTGCATGGC GATCGCCGAT
GAAGCCCATC ATCTCGGCGT TGATCCTGAC GAACCGGATG CCACCGCCTG GGGGCAGACC
TTTCTGGAGC TGACCGGCAG CGTGCGGCTG CGACTGGGGC TCACGGGTAC CCCCTTTCGT
GCCGACAACC TGGCGTTCTG CGCCGCCCGG CGCATGCGGG TGCGTCTGGA TGACGGCGGT
TGGGTTGAGC AGATCCGACC GGATCTCTGC GTTGAACCCA GGGACTTGAT CGCTGCAGGG
GATGTGCGCC CCCTGGAGTT CCGTTTCCAG GACGGCTGGG TGGAACACAG CCGAGAAGGA
CACCCCGACC GCGACGTTTC CCCCCTCTCG GTTGAGCAAC GGGAAAGCTG GCGCGCGCGC
AACCTGCGTC GCGCCATCCG CCTGGCCGAC AGCAGCAGCA TTGGTCAGCA GGTGCTGCTG
CGCGCCCAGC AGAAGCTGAA CAAGTTGCGT GAGCGACAGC CGCAGGCTGC TGGTCTTGTG
ATCGCCCGCG ACATCAGCCA TGCCGAAGCC ATCAGCCGGG TGTTGATTGA CGACGGCAAC
CGGGTGGAGT TGATCCATTC CCAGAGCCCG CAAGCAACGG AGCGCTTAAA CGCCTTCCAA
AGCGGTGACG CCGATTGGTT GGTGAGCATC GACATGTGCG CGGAGGGCTT TGATGCGCCA
CGTCTGCGGG TGGTGGCCTA TCTGACCACC GTGGTGACCC GGAGCCGTTT TGTGCAGGGC
ATCACCCGGG CTGTGCGAAT GACGCCCGAA CTGGCCGCCC GTGAAGCCAT TCCAAGAGAA
GCCTCCTACG TGTTTGCTCC GGCAGACCCG CTGCTGATGG ACTACGCCAG GTCATGGTCG
GTGGCCGAGC CCTACGTGCT GCGGCCTCAG GAGCATGAAG TCGAGGACGA GCAGCCGGGG
GTTGGAGCCT GGCGCGGACC GAGCCTTCCC CTGGAAGCGG TGGAGGACGG AGCCGGCGCT
GTAATTCGTC TAAAAATGCC CGAATTGCCC ACTTTTTTGC AGCGCTGA
 
Protein sequence
MFAGPGAGKT LGAMLGFRAM RDQGRLDHFV VFCHRTSILN QWKSAAARLG LQLEEWSCPP 
EQSQDADGLL VTYQGAGRQL EALGARLEQW GLSACMAIAD EAHHLGVDPD EPDATAWGQT
FLELTGSVRL RLGLTGTPFR ADNLAFCAAR RMRVRLDDGG WVEQIRPDLC VEPRDLIAAG
DVRPLEFRFQ DGWVEHSREG HPDRDVSPLS VEQRESWRAR NLRRAIRLAD SSSIGQQVLL
RAQQKLNKLR ERQPQAAGLV IARDISHAEA ISRVLIDDGN RVELIHSQSP QATERLNAFQ
SGDADWLVSI DMCAEGFDAP RLRVVAYLTT VVTRSRFVQG ITRAVRMTPE LAAREAIPRE
ASYVFAPADP LLMDYARSWS VAEPYVLRPQ EHEVEDEQPG VGAWRGPSLP LEAVEDGAGA
VIRLKMPELP TFLQR