Gene Syncc9605_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1957 
Symbol 
ID3735649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1774589 
End bp1775896 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID637776542 
Producthomoserine dehydrogenase 
Protein accessionYP_382253 
Protein GI78213474 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA AGGTCGGCGT GGGTCTGCTG GGACTGGGCA CGGTTGGCGG CGGAGTCGCT 
TCGATCCTCC AGAACCCCAG CGAACGTCAC CCTCTGGTGG GTGAACTGGA GCTGATCCGT
GTTGCCGTCC GCGATCTGAA CCGTCCCCGG CCCGTCGCCC TGGATGAAAG CCTGCTTACC
ACCGACCCAT CGGCGGTGAT TCAGGACCCA GCCGTGGACG TGGTGGTGGA GGTGATCGGT
GGCCTGGAGC CGGCCCGCAG CCTGATTCTC CAGGCGATTG CAGCCGGCAA ATCCGTGGTG
ACCGCCAACA AGGCCGTGAT CGCACGCCAC GGTCAGGAAA TTGCTGAAGC CGCGGCCGCT
GCCGGGGTGT ACGTGCTGAT CGAGGCCGCC GTTGGTGGCG GCATTCCCAT CATTGAGCCG
CTGAAGCAGT CCCTAGGGGG CAACCGCATC AACCGCGTCA GCGGCATCAT CAACGGCACC
ACCAACTACA TCCTCACCCG CATGGCTGAG GAGGGGGCCG CCTATGACGC GGTGCTCAAG
GATGCCCAGG AGCTGGGCTA CGCCGAAGCC GATCCGGCAG CGGATGTGGA CGGACTTGAC
GCGGCCGACA AGATCGCAAT CCTGGCCACC CTGGCCTTCG GCGGCAGCGT GGATCGGGCT
GCTGTTCCCA CAGACGGCAT CAGTGGCCTG CAGGGCGTGG ATGTGGATTA CGCCAATCAA
CTGGGCTATG GCGTGAAGCT GCTGGCCGTG GCCGAGCGCA TGGCCGAAAG CGGCGATCCC
CTGCCCCTCT CCCTGCGGGT GCAGCCCACG CTGGTGCCCA AGGACCACCC ACTGGCGGGC
GTGAACGGGG TCAACAACGC CATTCTTGTG GAAGGTGACC CTATCGGCCG GGTGATGTTC
TACGGCCCTG GAGCAGGAGC CGGCCCGACC GCCTCTGCGG TGGTGGCCGA CATCCTCAAC
ATCGCTGGCA TCCGCCAGGC CAGTGAAGGA CCTGGGAAGG TGGATCCTTT GCTGGCCGCC
AGCAGCTGGC GGCCCTGCTC TCTCGTCGAC TCAGGCGACA TTCGCCAACG CCACTATGTG
CGTTTCAAGA CAAAAGACGC CCCTGGCGTG ATCGGCAACG TGGGCGGCTG CTTCGGCCAA
CGCAACGTGT CGATCCAATC GATCGTGCAG TTCAACGCCA GCGACGCCGG CGCCGAGATC
GTTGTGATCA CTCACGAAGT GAGCCAACGC CAGATGAATG AAGCGCTCGA CGCCATTCAG
GCATTGCCGG AGGTGTCTGG CCTGGCTGCT CATCTGGGTT GCCTCTAG
 
Protein sequence
MAAKVGVGLL GLGTVGGGVA SILQNPSERH PLVGELELIR VAVRDLNRPR PVALDESLLT 
TDPSAVIQDP AVDVVVEVIG GLEPARSLIL QAIAAGKSVV TANKAVIARH GQEIAEAAAA
AGVYVLIEAA VGGGIPIIEP LKQSLGGNRI NRVSGIINGT TNYILTRMAE EGAAYDAVLK
DAQELGYAEA DPAADVDGLD AADKIAILAT LAFGGSVDRA AVPTDGISGL QGVDVDYANQ
LGYGVKLLAV AERMAESGDP LPLSLRVQPT LVPKDHPLAG VNGVNNAILV EGDPIGRVMF
YGPGAGAGPT ASAVVADILN IAGIRQASEG PGKVDPLLAA SSWRPCSLVD SGDIRQRHYV
RFKTKDAPGV IGNVGGCFGQ RNVSIQSIVQ FNASDAGAEI VVITHEVSQR QMNEALDAIQ
ALPEVSGLAA HLGCL