Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1957 |
Symbol | |
ID | 3735649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1774589 |
End bp | 1775896 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637776542 |
Product | homoserine dehydrogenase |
Protein accession | YP_382253 |
Protein GI | 78213474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAA AGGTCGGCGT GGGTCTGCTG GGACTGGGCA CGGTTGGCGG CGGAGTCGCT TCGATCCTCC AGAACCCCAG CGAACGTCAC CCTCTGGTGG GTGAACTGGA GCTGATCCGT GTTGCCGTCC GCGATCTGAA CCGTCCCCGG CCCGTCGCCC TGGATGAAAG CCTGCTTACC ACCGACCCAT CGGCGGTGAT TCAGGACCCA GCCGTGGACG TGGTGGTGGA GGTGATCGGT GGCCTGGAGC CGGCCCGCAG CCTGATTCTC CAGGCGATTG CAGCCGGCAA ATCCGTGGTG ACCGCCAACA AGGCCGTGAT CGCACGCCAC GGTCAGGAAA TTGCTGAAGC CGCGGCCGCT GCCGGGGTGT ACGTGCTGAT CGAGGCCGCC GTTGGTGGCG GCATTCCCAT CATTGAGCCG CTGAAGCAGT CCCTAGGGGG CAACCGCATC AACCGCGTCA GCGGCATCAT CAACGGCACC ACCAACTACA TCCTCACCCG CATGGCTGAG GAGGGGGCCG CCTATGACGC GGTGCTCAAG GATGCCCAGG AGCTGGGCTA CGCCGAAGCC GATCCGGCAG CGGATGTGGA CGGACTTGAC GCGGCCGACA AGATCGCAAT CCTGGCCACC CTGGCCTTCG GCGGCAGCGT GGATCGGGCT GCTGTTCCCA CAGACGGCAT CAGTGGCCTG CAGGGCGTGG ATGTGGATTA CGCCAATCAA CTGGGCTATG GCGTGAAGCT GCTGGCCGTG GCCGAGCGCA TGGCCGAAAG CGGCGATCCC CTGCCCCTCT CCCTGCGGGT GCAGCCCACG CTGGTGCCCA AGGACCACCC ACTGGCGGGC GTGAACGGGG TCAACAACGC CATTCTTGTG GAAGGTGACC CTATCGGCCG GGTGATGTTC TACGGCCCTG GAGCAGGAGC CGGCCCGACC GCCTCTGCGG TGGTGGCCGA CATCCTCAAC ATCGCTGGCA TCCGCCAGGC CAGTGAAGGA CCTGGGAAGG TGGATCCTTT GCTGGCCGCC AGCAGCTGGC GGCCCTGCTC TCTCGTCGAC TCAGGCGACA TTCGCCAACG CCACTATGTG CGTTTCAAGA CAAAAGACGC CCCTGGCGTG ATCGGCAACG TGGGCGGCTG CTTCGGCCAA CGCAACGTGT CGATCCAATC GATCGTGCAG TTCAACGCCA GCGACGCCGG CGCCGAGATC GTTGTGATCA CTCACGAAGT GAGCCAACGC CAGATGAATG AAGCGCTCGA CGCCATTCAG GCATTGCCGG AGGTGTCTGG CCTGGCTGCT CATCTGGGTT GCCTCTAG
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Protein sequence | MAAKVGVGLL GLGTVGGGVA SILQNPSERH PLVGELELIR VAVRDLNRPR PVALDESLLT TDPSAVIQDP AVDVVVEVIG GLEPARSLIL QAIAAGKSVV TANKAVIARH GQEIAEAAAA AGVYVLIEAA VGGGIPIIEP LKQSLGGNRI NRVSGIINGT TNYILTRMAE EGAAYDAVLK DAQELGYAEA DPAADVDGLD AADKIAILAT LAFGGSVDRA AVPTDGISGL QGVDVDYANQ LGYGVKLLAV AERMAESGDP LPLSLRVQPT LVPKDHPLAG VNGVNNAILV EGDPIGRVMF YGPGAGAGPT ASAVVADILN IAGIRQASEG PGKVDPLLAA SSWRPCSLVD SGDIRQRHYV RFKTKDAPGV IGNVGGCFGQ RNVSIQSIVQ FNASDAGAEI VVITHEVSQR QMNEALDAIQ ALPEVSGLAA HLGCL
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