| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1870 |
|---|
| Symbol | |
|---|
| ID | 3736442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1699867 |
|---|
| End bp | 1700343 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637776455 |
|---|
| Product | Holliday junction resolvase YqgF |
|---|
| Protein accession | YP_382168 |
|---|
| Protein GI | 78213389 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.950837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCGC GTCCCTGTTC GATCCTCAGC CTGGATGTGG GTCGGCGGCG CATCGGCCTG
GCCGGCTGCG ATGCCCTCGG CATCAGCGTC ACGCCCCTCG CTGCCCTTCG CCGCGGTCGC
TTTGATGCCG ATCTGGTCGT TCTGCAGGCC CACTGCTGCG AACGGTCGGT GCAGGGGCTC
GTGGTGGGCT TGCCCCTGGA TGCCGCGGGC CAGCCCACCG CTCAGGCGGA GCATTGCCAG
CGTTACGGCC TGCGCCTGGC TGCCGCCCTC GATCTGCCCC TGGCCTGGGT GAATGAACAC
AGCAGCACCT GGGCGGCCGG TGAACAGTTC GGGCTGAAGG GCGACCGCAG CGGACGTCTC
GACAGTGCAG CCGCCGCCCT GCTGCTGGAG CAATGGCTGG CGGAGGGTCC GGAGCTCAAA
CCGGCCCAAC AGACTGCGTC AAGGTCGGGC GCCGGGGCGG GCGATGGTGG ATCCTGA
|
|---|
| Protein sequence | MRPRPCSILS LDVGRRRIGL AGCDALGISV TPLAALRRGR FDADLVVLQA HCCERSVQGL
VVGLPLDAAG QPTAQAEHCQ RYGLRLAAAL DLPLAWVNEH SSTWAAGEQF GLKGDRSGRL
DSAAAALLLE QWLAEGPELK PAQQTASRSG AGAGDGGS
|
|---|
| |