Gene Syncc9605_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1806 
Symbol 
ID3737139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1643714 
End bp1644457 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID637776392 
ProductATPase 
Protein accessionYP_382106 
Protein GI78213327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.842088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCG CCATTCGTGC CACTGATCTG GTCAAGAGCT ATTCCCAAGG GGTTCGAGCT 
CTCGACGGCG TCACCCTTGA GGTGAACAGC GGCGAAGTGC TCGTGGTGAT GGGTCCTTCC
GGGTCCGGCA AGAGCACGCT GATCCGCACG TTCAACGGTC TGGAGTCGCT GGATGGCGGA
GCTCTTGATG TACTCGGGGT TCCCTTGGAT GCCACCCATG GGGAACGTCA GGTGCGGGCG
ATTCGCAAGC GCGTGGGGAT GGTGTTTCAG CAGTTCAACC TGTTTCCCCA CCTTTCCATC
CTCGACAACA TCACCCTTGC CCCGATCAAG GTGCAACAGC GTGCCAAGGC GGCTGCCGAG
CAGCGGGCCA TGGAGCTCCT TGACCAGATG GGCATTCGAG AGCAGGCCCA CAAGTACCCG
GCGCAGCTCA GTGGTGGTCA GCAGCAGCGG GTGGCGATCG CCCGTGCTTT GGCGTTGGAT
CCTGAGGTGA TGCTGTTCGA CGAGCCCACC AGCGCCTTGG ATCCGGAGCG GGTGAAAGAA
GTGTTGGATG CCATGCGTCA GTTGGCCAAA GGCGGCATGA CGATGGTGGT GGTCACCCAC
GAACTGGGCT TTGCCCGTGA GGTGGCGGAT CGGGTGATGT TCATGGATCG GGGCCAGGTG
GTGGAGACCT CCGATCCAGA GACGTTCTTT AGCAATGCCA GGGAAGAACG CAGCCGCAGG
TTCCTCAATC AGATGCAGCA CTAA
 
Protein sequence
MTVAIRATDL VKSYSQGVRA LDGVTLEVNS GEVLVVMGPS GSGKSTLIRT FNGLESLDGG 
ALDVLGVPLD ATHGERQVRA IRKRVGMVFQ QFNLFPHLSI LDNITLAPIK VQQRAKAAAE
QRAMELLDQM GIREQAHKYP AQLSGGQQQR VAIARALALD PEVMLFDEPT SALDPERVKE
VLDAMRQLAK GGMTMVVVTH ELGFAREVAD RVMFMDRGQV VETSDPETFF SNAREERSRR
FLNQMQH