Gene Syncc9605_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1623 
Symbol 
ID3736002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1492617 
End bp1493483 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content64% 
IMG OID637776211 
Productputative phosphatidate cytidylyltransferase 
Protein accessionYP_381927 
Protein GI78213148 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.942257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.416685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTG AGGTTGTCCT CGAGCAGAGC CAAGCGCCAG CGGCCCGAGC AGCGCTGCGC 
AAGCGATTGA TCAGTGGCCT GGGTGTGGGC GGCTTTGGCC TGCTGGTGGT GAGCCTGGGC
GGGTGGTGGT TCACCGCCGC GCTGGGGGGA ATGGTGCACC TCGGCCTGCT CGAGTTCTTC
CGGATGGCGC AATTCAAGGG AATTCGCCCC GCCACAAAAA CCACCTTGGT GGCTTGCCAA
CTGCTGCTGT TCACCACCCA GTGGGCGATT CAGGGCGGGC TGCCGGCTGA TGTGGCCCAT
GCCGTTCTGC CGCTCTCCGG AGCCGCCATC TGCGGTTGGC TGCTGCTGCA ACCGGTGACG
GGTTCCATCG CCGACATTGC GGCATCGATC TTCGGGTTGT TCTACCTCGG CTTTCTGCCC
AGCCACTGGC TGAGTCTGCG CGGTTTGGAC AACGGCCTGG AGATCACCCT GTCGGCCTGC
CTGATGATCG TCGCCACCGA CATCGGCTCC TGGGCCGTGG GACGGCGCTA CGGGCGACGG
CCCCTCTCAC CGATCTCCCC CGGGAAAACC ATCGAAGGGG CGATCGGTGG ATTCATGTCG
GCCATGCTGG TCGGCCTGGT CTGCGGCAAG CTGATGGTCT GGGCCCTGCA TGGCCTACCG
GGCCTGCTGC TGGGGGCACT GATCGCTCTG TTCGCCCTGG TGGGAGACCT GACCGAATCG
ATGATGAAAC GCGATGCAGG CGTGAAGGAT TCCGGTGATG TTCTTCCCGG CCATGGCGGG
ATCCTGGACC GGATCGACAG TTATCTGTTC ACCCCAGCGG TGGTCTTCTA CGCGATTGCT
CTTTGCCAAC CACTGTTGGC GTCGTAA
 
Protein sequence
MIREVVLEQS QAPAARAALR KRLISGLGVG GFGLLVVSLG GWWFTAALGG MVHLGLLEFF 
RMAQFKGIRP ATKTTLVACQ LLLFTTQWAI QGGLPADVAH AVLPLSGAAI CGWLLLQPVT
GSIADIAASI FGLFYLGFLP SHWLSLRGLD NGLEITLSAC LMIVATDIGS WAVGRRYGRR
PLSPISPGKT IEGAIGGFMS AMLVGLVCGK LMVWALHGLP GLLLGALIAL FALVGDLTES
MMKRDAGVKD SGDVLPGHGG ILDRIDSYLF TPAVVFYAIA LCQPLLAS