| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1601 |
|---|
| Symbol | |
|---|
| ID | 3736706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1471773 |
|---|
| End bp | 1472426 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637776189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_381905 |
|---|
| Protein GI | 78213126 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3689] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0638149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGCG CAACCCTGCT GCTGCTCTGG GGCCTAACGC TGTTGTGGAG CTTCCACAGC
GGACGCCTCG ATCTGCTGCT TCGCGGGGTT TTTCACGGCC TGGTGGGGGT CACCGGCCTT
GTCTTGCTGA TGCTGGGCGT GGCCGTTCTG CTGAAAAGAG AGAAGCAAGA CGAACGCTGG
CGCTGGCCCT GGCTGCTCAG CGGTGTGATG GCTGCGCTGG TGCTGATCCT TCCGCCCAGC
CCCTCCTTCA GCGATCTGGC CAGCAACCGC CCCCAGGGCC TACCCGATCC ACCGGAATTG
GCCTTTGTTC TTCCCCCCGA ACAACGCAGC CTCACGGAAT GGGTGCGCTT GCTTCGCAGC
CAATCTGACC CTGATCTTGT GGAAGGCAAT CCTGTGCGCA TCAGCGGTTT TGTCTGGAGG
CAACCCCAGG GCCCGCCGCT GATCGCCCGA CTCACGGTGC GGTGTTGCCT GGCCGACGCC
ACGCCCGCTG GCCTGGCGGT GGAGTGGCCG GAGTCGTTCA GCCCCCAAAC CAACCAATGG
TTGGCCATCG AGGGAACGAT GAGCGTGCAA ATCCGGAACG AACGGCGCAT CCCCGTCGTG
ATTCCTGAAA ACATCACACC GATTGCCAGG CCCGAGCGGC CCCTGGAACC ATGA
|
|---|
| Protein sequence | MKRATLLLLW GLTLLWSFHS GRLDLLLRGV FHGLVGVTGL VLLMLGVAVL LKREKQDERW
RWPWLLSGVM AALVLILPPS PSFSDLASNR PQGLPDPPEL AFVLPPEQRS LTEWVRLLRS
QSDPDLVEGN PVRISGFVWR QPQGPPLIAR LTVRCCLADA TPAGLAVEWP ESFSPQTNQW
LAIEGTMSVQ IRNERRIPVV IPENITPIAR PERPLEP
|
|---|
| |