Gene Syncc9605_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1503 
Symbol 
ID3737698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1395839 
End bp1396699 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID637776092 
Producthypothetical protein 
Protein accessionYP_381808 
Protein GI78213029 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.623229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.868724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCT GTTTCGGGAT TGTTGGTTGT GGATATGTCG GTTCTGCTGT TGCAGCCCAT 
CTCAGGCACC AAGGCCATGA GGTTGTCGGC ACTACCACAA GCCCCGGACG ACTGGCTGAA
CTCTGCGATC TGGTTGACCA TCCCCGTCTT TACAGCGCGG AAGACCCGGT GGCAGACACC
AGCTTCCTGG ATCGGCTTGA CGGCGTTTTG ATTGCGATGG CCCCCACCAC CGCCACCTTT
GAAGAGGATC AATACGAGAA GGTCTATGGC CAAGCGGTGC CGGCCCTGGT GGATGCCATC
CGTCAACGGC AGGGGTGTAA GCCGCTGCAT GTGGCGTACC TGAGCAGTGC AGGCGTTTAT
GGCGATCAGT CCGGTGCGAT CTGCAATGAA CTGACGCCCC CGGATTGTTC CAACGGTGCG
AACGCTCTTC TGGTCAGCGC CGAGAGCTGC GTTCTTGCGT TGAACGACGC CTCAACCCAG
GCCTGCGTGC TGCGACTTGG TGGTATCTAC GGTCCCGGTA AGGACATCCC GTCGTACATC
CGCAGCGCTG CTGGACAGTC GGTTCGCAAG AACGGTAATC ACATCAACGC CTGGGTTCAT
CTGCACGACA TCATCCGTGG CGTTGATTTC GCCTTCGGCC GGCGGCTCCA AGGCATCTAC
AACCTCGTGG ATGATCTCCA GTTCACCCGG CGTCAGCTCT CCAATGCTCT GTGTGATGAC
TTTGGACTGC CTCCCGTGAT CTGGGACAAC CATGATCGAC CTGGCGCCCG GGTCTTCAAT
GCCCGTATCA GCAACGCCCG GTTGCGTGAG ATCGGATTTC AGCCCAGCGT CAGCTCCATG
CTCGAACCTG TGGCGGCTTG A
 
Protein sequence
MPGCFGIVGC GYVGSAVAAH LRHQGHEVVG TTTSPGRLAE LCDLVDHPRL YSAEDPVADT 
SFLDRLDGVL IAMAPTTATF EEDQYEKVYG QAVPALVDAI RQRQGCKPLH VAYLSSAGVY
GDQSGAICNE LTPPDCSNGA NALLVSAESC VLALNDASTQ ACVLRLGGIY GPGKDIPSYI
RSAAGQSVRK NGNHINAWVH LHDIIRGVDF AFGRRLQGIY NLVDDLQFTR RQLSNALCDD
FGLPPVIWDN HDRPGARVFN ARISNARLRE IGFQPSVSSM LEPVAA