Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1408 |
Symbol | |
ID | 3737127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1323105 |
End bp | 1324370 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637776001 |
Product | ABC transporter, likely sugar solute binding protein |
Protein accession | YP_381717 |
Protein GI | 78212938 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.590186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC GCCGCTTGCT CGCAGGCGGT GCCCTGGCGC TGGTGATGGC CCTGGGAGCC CTGATCGGGT CAGCCTCCTT TAGGGCGGAG GAGGTGAGCA TCCTGATGCC GTCATCCTTC ACCGATGCCA GTGCTGATCT GGTGAAAGCC TTCAACCGTG AGCATCGCGG CCGGATTCAT CTCAGCTTGA TCCGAGGTCC GTTGAACACG GAATCGATCT CAGATCTAGC GATTAGCAGT CTTCTGCTCG GCGATGCGCC CTTCGACGCG CTGTTGATGG ATGTCACCTG GCTGCCGAAA TATGCCGCCG CCGGCTGGCT GGAACCCCTG GATCCCTGGT TTGATCAGGG CGACCAGGAG CAGCTGGTGC AAGGGGCACG GCTGGGCAAT GACTACAACG GCCATCTCTA CCGCTGGCCC CTTGTGGCCG ATGTGGGACT GCTCTACTGG CGCACGGATC TGATGGATCA GCCACCAGCA ACGCCCGATG CACTGGTGGA GGTTGCTGGA CGCCTCGTTA AAAGCGAAGC CGTTGCCAAC GGTTTTGTCT GGCAGGGACG TCAGTACGAA GGCCTGAGCT GCGACTTCCT TGAAGTGCTG CAGGGCTTCG GCGGTGGCTG GATGGACACC ACCACCAACA CCATGGAACT CGATACGCCT GCGGCGACGG CCGCGGCAGC CTGGTTGGAC GATCTAATCA GCGAAGGCGT AAGCCCCTAC GCCGTGACCA ATTACGCCGA GGCGGAGTCG CTTCAGGCCT TCAAGGCAGG GGATGCAGCG CTGATGCGCA ACTGGCCCTA CGCCTGGGCT GAGCTGCAGA AGGACGACAG CACGGTGAAA GGCAACGTAG GCATCAGCCT GATGGTGGCG CAACCGGGTG AACGTCCCGG AGCCACCCTC GGCAGCTGGG GGCTGAGCCT GATGCGCCAA TCGCAGCACC AGGAGGCAGC GGTGGAAGCG ATTCGCTACC TCACCAGCGA AACCGCCCAG CGGCAGCGCT TTCTCAACAA TGGCTACACA CCCATCCAGG CGGATCTGTT CAACGATCCG GAGATGTTGA AGGCCTCTCC AGTGCTGCCT GATCTGCTGG TGGGCTTGAA CCATGCGGTG GTTCGTCCAC CAACCCCGCT TTATGCCCAG CTAAGCGATG TGGTGCAGCG GGAACTCAAT GGCTTGTTCA CCGCTGCCGG GTCCGCCGAT GAGGCCATGG CCACCACGCA GCAGCGGAGC CAGACCCTGC TGCGTGCTGC GGGAGCCACG CCATGA
|
Protein sequence | MKLRRLLAGG ALALVMALGA LIGSASFRAE EVSILMPSSF TDASADLVKA FNREHRGRIH LSLIRGPLNT ESISDLAISS LLLGDAPFDA LLMDVTWLPK YAAAGWLEPL DPWFDQGDQE QLVQGARLGN DYNGHLYRWP LVADVGLLYW RTDLMDQPPA TPDALVEVAG RLVKSEAVAN GFVWQGRQYE GLSCDFLEVL QGFGGGWMDT TTNTMELDTP AATAAAAWLD DLISEGVSPY AVTNYAEAES LQAFKAGDAA LMRNWPYAWA ELQKDDSTVK GNVGISLMVA QPGERPGATL GSWGLSLMRQ SQHQEAAVEA IRYLTSETAQ RQRFLNNGYT PIQADLFNDP EMLKASPVLP DLLVGLNHAV VRPPTPLYAQ LSDVVQRELN GLFTAAGSAD EAMATTQQRS QTLLRAAGAT P
|
| |