Gene Syncc9605_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1408 
Symbol 
ID3737127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1323105 
End bp1324370 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID637776001 
ProductABC transporter, likely sugar solute binding protein 
Protein accessionYP_381717 
Protein GI78212938 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.590186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC GCCGCTTGCT CGCAGGCGGT GCCCTGGCGC TGGTGATGGC CCTGGGAGCC 
CTGATCGGGT CAGCCTCCTT TAGGGCGGAG GAGGTGAGCA TCCTGATGCC GTCATCCTTC
ACCGATGCCA GTGCTGATCT GGTGAAAGCC TTCAACCGTG AGCATCGCGG CCGGATTCAT
CTCAGCTTGA TCCGAGGTCC GTTGAACACG GAATCGATCT CAGATCTAGC GATTAGCAGT
CTTCTGCTCG GCGATGCGCC CTTCGACGCG CTGTTGATGG ATGTCACCTG GCTGCCGAAA
TATGCCGCCG CCGGCTGGCT GGAACCCCTG GATCCCTGGT TTGATCAGGG CGACCAGGAG
CAGCTGGTGC AAGGGGCACG GCTGGGCAAT GACTACAACG GCCATCTCTA CCGCTGGCCC
CTTGTGGCCG ATGTGGGACT GCTCTACTGG CGCACGGATC TGATGGATCA GCCACCAGCA
ACGCCCGATG CACTGGTGGA GGTTGCTGGA CGCCTCGTTA AAAGCGAAGC CGTTGCCAAC
GGTTTTGTCT GGCAGGGACG TCAGTACGAA GGCCTGAGCT GCGACTTCCT TGAAGTGCTG
CAGGGCTTCG GCGGTGGCTG GATGGACACC ACCACCAACA CCATGGAACT CGATACGCCT
GCGGCGACGG CCGCGGCAGC CTGGTTGGAC GATCTAATCA GCGAAGGCGT AAGCCCCTAC
GCCGTGACCA ATTACGCCGA GGCGGAGTCG CTTCAGGCCT TCAAGGCAGG GGATGCAGCG
CTGATGCGCA ACTGGCCCTA CGCCTGGGCT GAGCTGCAGA AGGACGACAG CACGGTGAAA
GGCAACGTAG GCATCAGCCT GATGGTGGCG CAACCGGGTG AACGTCCCGG AGCCACCCTC
GGCAGCTGGG GGCTGAGCCT GATGCGCCAA TCGCAGCACC AGGAGGCAGC GGTGGAAGCG
ATTCGCTACC TCACCAGCGA AACCGCCCAG CGGCAGCGCT TTCTCAACAA TGGCTACACA
CCCATCCAGG CGGATCTGTT CAACGATCCG GAGATGTTGA AGGCCTCTCC AGTGCTGCCT
GATCTGCTGG TGGGCTTGAA CCATGCGGTG GTTCGTCCAC CAACCCCGCT TTATGCCCAG
CTAAGCGATG TGGTGCAGCG GGAACTCAAT GGCTTGTTCA CCGCTGCCGG GTCCGCCGAT
GAGGCCATGG CCACCACGCA GCAGCGGAGC CAGACCCTGC TGCGTGCTGC GGGAGCCACG
CCATGA
 
Protein sequence
MKLRRLLAGG ALALVMALGA LIGSASFRAE EVSILMPSSF TDASADLVKA FNREHRGRIH 
LSLIRGPLNT ESISDLAISS LLLGDAPFDA LLMDVTWLPK YAAAGWLEPL DPWFDQGDQE
QLVQGARLGN DYNGHLYRWP LVADVGLLYW RTDLMDQPPA TPDALVEVAG RLVKSEAVAN
GFVWQGRQYE GLSCDFLEVL QGFGGGWMDT TTNTMELDTP AATAAAAWLD DLISEGVSPY
AVTNYAEAES LQAFKAGDAA LMRNWPYAWA ELQKDDSTVK GNVGISLMVA QPGERPGATL
GSWGLSLMRQ SQHQEAAVEA IRYLTSETAQ RQRFLNNGYT PIQADLFNDP EMLKASPVLP
DLLVGLNHAV VRPPTPLYAQ LSDVVQRELN GLFTAAGSAD EAMATTQQRS QTLLRAAGAT
P