Gene Syncc9605_1363 details

Gene Information

• Locus tag: Syncc9605_1363
• Symbol: uvrC
• ID: 3736298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9605
• Kingdom: Bacteria
• Replicon accession: NC_007516
• Strand: -
• Start bp: 1277902
• End bp: 1279887
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637775955
• Product: excinuclease ABC subunit C
• Protein accession: YP_381672
• Protein GI: 78212893
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.205269
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.348926
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGATGCTG CCTCTGGTGC ACCGCTGCTG ACGCAGCCCG AGCGTCTTGA ACGCCGCCTG 
AAGGAGATCC CCGCTGAGCC GGGTTGCTAT CTGATGCGGG ACTGCGACGA CCGGATCCTC 
TACGTCGGCA AGTCGAAGGC GTTGCGCAGC CGTGTGCGCA GCTATTTCCG CAGCCGCCAC 
GATCTGTCGC CACGGATCCG GCTGATGACA CGCCAGGTCT GTGAGATTGA GTTCATCGTC 
ACCGACAGCG AGGCGGAGGC CCTCGTCCTC GAGTCGAACC TGATCAAGAA CCATCAGCCG 
CACTTCAACG TGCTGCTGAA GGACGACAAG AAATACCCAT ACCTCTGCAT CACCTGGAGT 
GAGGCCTACC CACGGATTTT CATCACCCGT CGCCGTCGCT TCCGCAGCCC TCTCGACCGC 
TTTTACGGGC CCTATGTCGA TGTCGGCCTG CTGCGTCGCA CCCTGTTCCT GGTGAAGCGG 
GTGTTCCCGC TGCGGCAACG GCCCCGACCG ATGTACCCCG ATCGCACGTG CCTCAACTAC 
AGCATCGGGC GCTGTCCGGG GGTTTGCCAG GAAAAAATCA GCTCGGTGGA CTATCACCGC 
ACCCTCCGAA AGGTGGCGAT GGTGTTCCAG GGCCGCAGCG ATGAACTGCA GCATCTGCTT 
CAGGAGCAGA TGGAGCGGTA TGCCGAGCGG ATGGACTACG AGTCGGCGGC CCGGGTTCGG 
GATCAACTTC AGGGCCTGGA TCAGCTCACC GCCGACCAGA AGATGAGCTT GCCTGACTCC 
TCCGTGAGTC GGGATGTGCT GGCCCTTGCC TTCGACGAAC GCCTGGCAGC CGTGCAGCTG 
TTTCAAATGC GCGCTGGCAA GTTGGTGGGT CGTCTCGGCT ACACCGCCGA TGCCTCAGGC 
CTGGAACCTG GCCTGATCCT GCAACGGGTG ATCGAAGAGC ACTACAGCCA GGTGGATTCC 
GTCGAGGTGC CCCCCGAGCT GTTGGTGCAG CACGCTCTGC CCCAGCAGAA ACTGATGGAG 
GACTGGCTCA CGGAACAGCG GGAGCGTCGG GTTCAGATCC ACTGCCCCCA GCGCCAGCAG 
AAAGCCGATC TGATCGAACT GGTGCAGCGC AACGCGGAGT TTGAGTTGCT CCGTGCCAAG 
CAAGGTCAGG AGAAGCAGTC GTTGGCCACG GAGGATCTGG CGCAACTGCT GGAGTTGCCC 
ACCCCGCCGC GGCGGATCGA GGGGTACGAC ATCAGTCACA TCCAGGGCAG CGATGCCGTG 
GCGTCGCAAG TGGTGTTCAT CGACGGACTG CCCGCCAAGC AGCACTACCG CAAGTACAAG 
ATCCGCAGCA GCAGCATCCG CGCTGGCCAC AGCGACGACT TCATGGCGAT GGCGGAAATC 
ATGCGCCGTC GTTTTCGTCG CTGGGCCCGG GCGAAGGCGG AAGGGATGGA TGTGGGTGCT 
CTGCGTCACA AAGGCGGCAG CGCTCTGCAG ACCGACGGCC TCAACGACTG GCCCGATGTG 
GTGATGATTG ACGGCGGTAA GGGCCAGCTC TCTGCCGTGA TGGAGGCCCT TCGCGAGCTT 
GATCTGCATG AGGATCTCAA CGTCTGCTCC CTCGCCAAGC AGCGCGAAGA GGTGTTTCTC 
CCCGGTGAAA GCCAGCCGCT GGAGAGTGAA CCGGATCAGC TCGGGGTTGT GCTGCTTCGC 
CGCCTGCGGG ATGAAGCCCA CCGTTTCGCT GTCAGCTTCC ACCGCCAGCA GCGTGGTGAG 
CGGATGAAGC GGTCACGCCT CTCGGACATC CCCGGGGTTG GGCCCAAGCG GGTCAAGGAT 
CTCCTGGCTC ATTTCCATTC GATTGATGCC ATCCAGCTGG CATCGATTGA GACCCTGTCC 
AAGGCCCCGG GTGTGGGTCC GGCGCTGGCC CGCGACATCC ACGATTTCTT CCATCCTTCC 
GACGAAGGAA CCGACGCTGA TGCCAGGGCT GCTTTAGAAG AGCAGCCTCA GGAACTCTCC 
GCATGA 

 

Protein sequence

MDAASGAPLL TQPERLERRL KEIPAEPGCY LMRDCDDRIL YVGKSKALRS RVRSYFRSRH 
DLSPRIRLMT RQVCEIEFIV TDSEAEALVL ESNLIKNHQP HFNVLLKDDK KYPYLCITWS 
EAYPRIFITR RRRFRSPLDR FYGPYVDVGL LRRTLFLVKR VFPLRQRPRP MYPDRTCLNY 
SIGRCPGVCQ EKISSVDYHR TLRKVAMVFQ GRSDELQHLL QEQMERYAER MDYESAARVR 
DQLQGLDQLT ADQKMSLPDS SVSRDVLALA FDERLAAVQL FQMRAGKLVG RLGYTADASG 
LEPGLILQRV IEEHYSQVDS VEVPPELLVQ HALPQQKLME DWLTEQRERR VQIHCPQRQQ 
KADLIELVQR NAEFELLRAK QGQEKQSLAT EDLAQLLELP TPPRRIEGYD ISHIQGSDAV 
ASQVVFIDGL PAKQHYRKYK IRSSSIRAGH SDDFMAMAEI MRRRFRRWAR AKAEGMDVGA 
LRHKGGSALQ TDGLNDWPDV VMIDGGKGQL SAVMEALREL DLHEDLNVCS LAKQREEVFL 
PGESQPLESE PDQLGVVLLR RLRDEAHRFA VSFHRQQRGE RMKRSRLSDI PGVGPKRVKD 
LLAHFHSIDA IQLASIETLS KAPGVGPALA RDIHDFFHPS DEGTDADARA ALEEQPQELS 
A