| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1336 |
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| Symbol | |
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| ID | 3736099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1250528 |
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| End bp | 1252558 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637775928 |
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| Product | ribonuclease II |
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| Protein accession | YP_381645 |
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| Protein GI | 78212866 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.203025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAACT CAATCCAACC CGGAGACACC GTCGCGGTAG TTCTCAAGGG TTCCCCTCTA
TTCGGCCGTC TTCTGTCCAT CAAAGGCAGC AAGGCGGTTC TTTCTTTTGG TGGTCAACGT
CGTGACCAGG GTCTGCCCCT GCGCGACCTG ATTGCCATCG ATCCCGAGCA TCGCTTCGCG
AACAGTGCTT TACCGGCTCC TGAGCAGGTG CAGGACAGCG CTCCATCAGC ACGGGCCCTC
CTAGAGGCCT GGCAGCTACT GGAAACGGAT CAACCGGGGG GATTGGCTCG ATTGAGGCTC
TGCGACTTTG GCGAGTTGGT GCTGACCCCG TTCAACCTCG CTGGGCTGGC AGCCTTGTGG
GCCTGGCTTC ATGGGAACCA ACAGCTGTTC CGTTGGCGTC GCGACCGTTT GATCCAACCG
CTCCCCCGCG GGGAAAGGGA CAGCCTGCGG CGCCAACGTC GAGCTGAGCG GCAGGCACAA
CAGCATGAAC AACGACAGCT CGCGTTGCTT CGGGCTGAGC GAGCCCTCAG TGACGATGAA
CGCTTGGAAC TGGACCCGGT TTGGGACGAG CAGTTCAGAC ACTGGATTCA GTTGCTGAAA
GACAATCCCG CTGCGGTGGG TTCCGATCTT GATCTCCAGC AGTGGTCGGC AGCGTTGTCG
ATTGGATCGG ATGCCGCCGA TCTGCGGCAG TGGTTAATCG TGCGTGGGTT GCTCGATCCA
AACGAGCCCA TTGGCCTAAG AGGCAGCGTC TGGTCACGCC GTTTTCCCTC TGATCTGATG
GAGGAAGCGA ATCGCCTTGT TGCTCTTTCG GAAGAAGAAC TGCCTGCGGA TGAGCAACGC
ATCGACCTCA CCCACCTGGC CACCTACAGC CTGGACGATG CAGGCACCCG CGAAATTGAT
GACGCGCTCT CGCTGGAGCG TCGTGATGGC GTCAATTGGA TCTGGATCCA CATCGCTGAT
CCCAGCCGTC TGATCGACAT TGACTCCCCC CTGGATCAGG AAGCCAGACG TCGGGCCACA
AGCTTGTATC TGGCGGAGGG TGTGATGCCC ATGCTCCCTC TGGAACTGGC GGCCGGTCCC
CTCAGCCTTC GAGCTGGGCA GCGCTGTGCA GCACTGAGTG CAGCCGTTCA CCTCGATGCC
GATGGTGCTG TGGTGGAGCA ACGGATTGCT CGCAGCTGGA TCCGACCCCG CTATGGCCTC
ACGTACGGCG ATGGCGACGA GCTAATCGAG TTGGCACCTC CAGGAGATGA GGCCCTTTCG
GATCTTTCGG GACTGTTGAT GCAGCGCATG CGCTGGCGAC GCTCCAAAGG AGCCGTGATG
TTCGACCGCC CCGAAGGACG CTTCCGCCGC AGCGATGGGT CCTTGACGCT GCAGGTGATT
GACCCGTCAC CCTCCCGCCT GATGGTGAGT GAAGCGATGC TGCTGATGGG TGCTGTTGTG
GCCAGCTTTG GGCAAAAGCA CAACCTGCCT CTGCCGTTCC GCAGTCAGCC TGCGGCGGAG
CTGCCCTCAA GCGATGAACT CGATCGAATC CCCGAGGGAC CAGCCCGTGA TGCGGCGATC
AAGCGCTGCT TGAGCCGTGG CGTGCAGGGC ACGCGGGCCA TGCCCCATTT CAGTCTCGGC
CTTGAGGCCT ATGTGCAGGC GACGTCACCG ATTCGACGCT ACGCCGATCT CATCGCCCAC
CGGCAGATCA TTGCCCAGCT GTCGGCGCTT GAACCGATGG ATGAAGAGCG TCTTGGTGAA
GTGATTGACG ATCTCGATGA TCCATTGCGC CAATCCATTC AGATCAGCCG GGAGGATCAG
CGTCACTGGC AGCAGGTGTG GTTTGCCGAG CATCACAACA CCGTCTGGAC GGCCGTGTTC
CTGCGCTGGT TGCGCCCGCA GGATCGCTTG GCCTTGGTTC ATGTGAGCGA TCTGGCCATG
GATTTGGTGG GTTTTGTTTC TGCAGACGAC CCTTGCCCTG GCGACGTTCT TGAACTCAAG
GTGGGTCGTG CTGACCCGGT ACGTGGTGAG CTTCAGCTTC AGTTGGCTTG A
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| Protein sequence | MNNSIQPGDT VAVVLKGSPL FGRLLSIKGS KAVLSFGGQR RDQGLPLRDL IAIDPEHRFA
NSALPAPEQV QDSAPSARAL LEAWQLLETD QPGGLARLRL CDFGELVLTP FNLAGLAALW
AWLHGNQQLF RWRRDRLIQP LPRGERDSLR RQRRAERQAQ QHEQRQLALL RAERALSDDE
RLELDPVWDE QFRHWIQLLK DNPAAVGSDL DLQQWSAALS IGSDAADLRQ WLIVRGLLDP
NEPIGLRGSV WSRRFPSDLM EEANRLVALS EEELPADEQR IDLTHLATYS LDDAGTREID
DALSLERRDG VNWIWIHIAD PSRLIDIDSP LDQEARRRAT SLYLAEGVMP MLPLELAAGP
LSLRAGQRCA ALSAAVHLDA DGAVVEQRIA RSWIRPRYGL TYGDGDELIE LAPPGDEALS
DLSGLLMQRM RWRRSKGAVM FDRPEGRFRR SDGSLTLQVI DPSPSRLMVS EAMLLMGAVV
ASFGQKHNLP LPFRSQPAAE LPSSDELDRI PEGPARDAAI KRCLSRGVQG TRAMPHFSLG
LEAYVQATSP IRRYADLIAH RQIIAQLSAL EPMDEERLGE VIDDLDDPLR QSIQISREDQ
RHWQQVWFAE HHNTVWTAVF LRWLRPQDRL ALVHVSDLAM DLVGFVSADD PCPGDVLELK
VGRADPVRGE LQLQLA
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