| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1314 |
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| Symbol | |
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| ID | 3735869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1227175 |
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| End bp | 1229496 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637775904 |
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| Product | RNA binding S1 |
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| Protein accession | YP_381623 |
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| Protein GI | 78212844 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.207227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA CGGTTGCCGA TCTGCTGGAT CAGCTCTCGA CAGAGCATCC CTCTGAGTCA
GACCAACTGG CCAAGATCCT CAAGCTCAGC AACAAGACGG ACAAAGCAGC GCTTGAACTT
GCGGTTTCAT CACTGATGAA AATCGGTGTG ATCGAGCAGA CGAGTGAGGG TGGACTCACT
CGGCCCCAAG AGAGTGATCT GATTGATGCT CGCCTGCGCT GCAGCAGCAA AGGCTTCTGC
TTTGCCATTC GCGATGACGG CGGTGAGGAC ATTTACATCC GTGACCATCA GCTGAACCAC
GCCTGGAACG GTGATCGAGT GCTGGTGCTG GTGACGCGGG AGGGCGGCCG CCGCCGTTCT
CCAGAAGGTG GCGTTCAATG CATCCTGGAA CGGGCCACGC AATCGCTCCT GGCGCAGGTG
GAGCAGCAGA GTGAACAGCT GCTGGCCTCA CCTTTGGATG ACCGGGTGCT TGCTGGCATT
GAATTGCCAG CAGAGGATGC GAAGCACCTG CCCGGCGATG AGGTCTCCAG CGTTGTTGAG
GTACGGATCG ACCGCTATCC CGTGGCTCAG CATGCTGCGG CCGGCCATGT TGTTCGATCT
CTCCCGCTCA ATGGCGGACC GGCGGCAGAT CGAGACCTGC TCCTGACCAA GGCTGGGCTT
CAGGACCGAC CTGCAGCACC CCGAAGCTCT GGCAAAACAC CTGCGGCCAA GGGTCGGGTT
GATCTCACCG ACCAGCCTTC GCTACTTCTC AAAGGATGGA GTCAGGAGGA CGCGCCGGGG
TTGCCTGCCG TGCACGTTGA GCCCAAGGAC GGCGGATGTC GCCTCTGGGT CCATGTACCC
AGCGTGGGCG AGCGGATCGG GATAGGCAAT AGCCTTGAGG CATGCCTGCG TGATCGCGGC
GAAGCGCTTT GCCTCGGTGA GGTCTGGCAA CCCCTGTTGA CTCCATCCCT CAATAAGGTC
ACCAGCTTCT CCGCCGGTTC CGAGGCTGAC GCCATCAGCG TTCGGATCGA TCTTGCAGCC
AACGGTGAGG CGACCGATTG GGAGTTCATG CTGAGTTCGG TGCGCCCCGT CGCCGACGTA
AGCGCCGACC AGTTGATCGC CCTTGCGGAA CGCAAACCCA AGGCACGCAG CATCCCTGCG
GCTCTCAAAC CGATCAAAGA CCAGCTCGGT CAGCTGGAGA CCCTGCGGTT CTGCAGCACT
TTGCTGTTGG AGCACGAGCG CAGCAGCGGA GTTGTGCAAC TCGATCTCTG CCCTCCACAG
CTGGAAGCCC TTGGTGACTT GCGCAGCGCA GATCCATCCG GTTTGCGGCA TCGCTGGGTT
GATGCGTTCA ACCCGGTGGA CCCCCATGCG TTCCTTCAGC CTCTGTTGAG GGCTGCCGAC
CGTGCATGGA CCGCACAACG ACTCGATCTC CAATTGCCTG GAATCACCAT CGAGGCGGAT
GAACCCGATG GCAGCGTGCT GACCGATGTG GCGAAGACAG CCATTGCCTT AGACCTTCCA
CTGGAACTGG ATGACGACGG TTGCCCATCA GCTTCGGAAC TGATTCAGGT TTTCAAGCAC
AGCAGTCAAC GCCGCGTGCT TGAACAGCAG CTCAGTCATG CCCTGCCACC GCTCAGCCTT
GTGGCATCCA TAGAAGCCAG TTCAGCGGCA GCAGATTCCG ATGGGGAGGA TGCTGCTCCA
ATCCGCCCCA ACACATCACT GACCCCCTGG ACCTGTGCAA CTCAGCACTA CGCCCACCTG
GTGAACCAAC AGGTGATCGT TGCACTGCTC ACCGATGCCA AGGATCGTCC AACCGTGCGT
CACAAAACGC GTCTGAAGCT TGGGCTTAAG GGTGCCGGTG CTGATCTCAC ATGGCCCCTG
TTTACGGCAT CACAGGACGA GAAGCTGAAC GGATTGGTGA ATGAGCGCAC GGTGCAACGG
CTCAACACCC GTCGGCGCCA GGTGTTGGAA CTGGAGAAGG ATCTGCTGTC GATGATCCAG
GCCCGTTCAG CCCAGCCCCT GATCGGCGAA CAGGTGGAGG GGCGCATCAG CGGTGTGCAG
AGCTATGGCT TTTTCGTGGA AGTCGGTGAG AGTCGCGTTG AGGGGCTGGT TCATGTGAGC
TCCCTCAACG ATGACTGGTA CGAATACAGA TCACGTCAGA ATCGCCTGGT CGGTCGCAAG
AACCGTCAGA CCTATCAACT CGGCGATGCA GTTCAGGTGC GCGTGATCAA TGTGGATGTT
CTGCGCAATC AGATCGACCT TGAGGTCATC AGCCAGGCAT CCGATGCCTC CAGCGAGCCT
GAATCGTCGG AGCCGCTGCC TGTCGCCCTC AGCGAGCGCT GA
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| Protein sequence | MKFTVADLLD QLSTEHPSES DQLAKILKLS NKTDKAALEL AVSSLMKIGV IEQTSEGGLT
RPQESDLIDA RLRCSSKGFC FAIRDDGGED IYIRDHQLNH AWNGDRVLVL VTREGGRRRS
PEGGVQCILE RATQSLLAQV EQQSEQLLAS PLDDRVLAGI ELPAEDAKHL PGDEVSSVVE
VRIDRYPVAQ HAAAGHVVRS LPLNGGPAAD RDLLLTKAGL QDRPAAPRSS GKTPAAKGRV
DLTDQPSLLL KGWSQEDAPG LPAVHVEPKD GGCRLWVHVP SVGERIGIGN SLEACLRDRG
EALCLGEVWQ PLLTPSLNKV TSFSAGSEAD AISVRIDLAA NGEATDWEFM LSSVRPVADV
SADQLIALAE RKPKARSIPA ALKPIKDQLG QLETLRFCST LLLEHERSSG VVQLDLCPPQ
LEALGDLRSA DPSGLRHRWV DAFNPVDPHA FLQPLLRAAD RAWTAQRLDL QLPGITIEAD
EPDGSVLTDV AKTAIALDLP LELDDDGCPS ASELIQVFKH SSQRRVLEQQ LSHALPPLSL
VASIEASSAA ADSDGEDAAP IRPNTSLTPW TCATQHYAHL VNQQVIVALL TDAKDRPTVR
HKTRLKLGLK GAGADLTWPL FTASQDEKLN GLVNERTVQR LNTRRRQVLE LEKDLLSMIQ
ARSAQPLIGE QVEGRISGVQ SYGFFVEVGE SRVEGLVHVS SLNDDWYEYR SRQNRLVGRK
NRQTYQLGDA VQVRVINVDV LRNQIDLEVI SQASDASSEP ESSEPLPVAL SER
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