Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1292 |
Symbol | |
ID | 3737235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1204289 |
End bp | 1205821 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775882 |
Product | putative phosphonate ABC transporter |
Protein accession | YP_381601 |
Protein GI | 78212822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.871722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTAC GCATCGGCCT GAAGCCAGCC CTGCCGCTGA TCCCATTGCT GCCGGGTCTC AGTCTGCTGG GCGTTCTTGT GGTGCTGCTT CGCGATGGTC ACGGCGGAGG ACTTTCAGTT CTTCAACAGT TCGCCGCAGG GGCCGTGCAG CCCTGCATCG ATCCCATCGT TCTGGGTAGC TTGCTGAAGG GGCTCCAGAT CACCCTCGTG ATCGCCGTGA TGTCCTGGGG CATCAGCAGT GTTCTCGGTG TGGGTCTCGG CCTGCTGAGC TCAAGCACGT TCTGGGAGAT CCTGGCGGAC GTGCGTTGGC CTGCCCAGAT CTTGCGCCGT TGGCTGGCGC CCCTGCGCGC AGTGCATGAA CTGATCTGGG GGCTTTTGCT GCTTCAGGTG TTCGGACTAA ATGGCTGGGT TGCGGTCTGC GCCATCACGA TTCCCTACAC AGTTCTGATG GCGCGGGTGA TTGCCGATCA GGTGGATTGC CACGTTTCAC CGGCGATCCC CGTCCTCAAG GGAGCCGGCG CCACGCCATG GGCCGTGATG CTCACCGGGC TTGTCCCTCC GCTGGCAGAG CCGATCAGCG ACCACATCGG CCACCGCCTC GATTGCGCGC TTCGTTCAGC CTTGATTTTG GGCGTTTTCG GCCTCGGAGG ACTGGGGACA GACCTCAGCC TCAGCCTGCG CTCGCTTCAA TTTCAGGAGC TGTGGAGTGG CCTGTGGTTG CTGGCCATCG CCATGGTGGT GCTCGACCGA CTGCTGCGAA CGCTGCGCAG CTGGTCACGA CTGCTGATTC TCCTGGTGGC CATGGGCAGC CCATGGGTCG CCCTCGGCTG GGGAACACAG CTGGATTTGC AGCTGGCCTG GCCAGTGGCT GAGTGGTCGA TGGTTGTCGG CAACCTCATC GACGGATCCC AGGGATTCAA TGCTGCCCTG GAGATCTCCT GGCCCGGGGT GATTGGTGCA ACGGTGTGGA TCACCCTGAT TGCCGGTTGT GTTGCCACTA GCCTTCCACC ACTCCTGCTG CTGGTTTGGC CCAGCCAGGC CAGCCTGCGC CTGCAGGGAG TGGTGTGGGG CGCGTTGCGA CTCATCCCGG CACCTCTCAC TGCACTCCTG CTTCTGATGC TGGCCAAACC AAGCCTGGCC CTGGCGGGGC TGGCCCTGGG GCTGCACCAC GGCGGTGTGA TGGGTCGGGT GCTGATCGAC GACATTCGCA GCACGGGATT GCATTCCGCC CAGACCATGA AGGCCTGCGG CGCCACCCCT CGGGTGAGCT GGCTTTACGG CCCCCTGGCG GATGTGAGTC GCGCCTACCT CACCTATGCG ACTTACCGGT TGGATGTGAT CCTGCGCGAC ACTGCGATCA TCGGCATGGT GGGGGGAGCC GGTCTGGGCT GGCAGCTCAT GGAGGCCCTC AGCTCGTTTC ACTGGTGGCT GGTGCTCTGG ATCGTGCTGA TCTCCGCGTT GCTCACGCTG CTGGGTGAGA GCCTGGGGGA ACGACTTCAG GGGAGCTGGA ACAGCCGGGC CATGGCCTTA TGA
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Protein sequence | MALRIGLKPA LPLIPLLPGL SLLGVLVVLL RDGHGGGLSV LQQFAAGAVQ PCIDPIVLGS LLKGLQITLV IAVMSWGISS VLGVGLGLLS SSTFWEILAD VRWPAQILRR WLAPLRAVHE LIWGLLLLQV FGLNGWVAVC AITIPYTVLM ARVIADQVDC HVSPAIPVLK GAGATPWAVM LTGLVPPLAE PISDHIGHRL DCALRSALIL GVFGLGGLGT DLSLSLRSLQ FQELWSGLWL LAIAMVVLDR LLRTLRSWSR LLILLVAMGS PWVALGWGTQ LDLQLAWPVA EWSMVVGNLI DGSQGFNAAL EISWPGVIGA TVWITLIAGC VATSLPPLLL LVWPSQASLR LQGVVWGALR LIPAPLTALL LLMLAKPSLA LAGLALGLHH GGVMGRVLID DIRSTGLHSA QTMKACGATP RVSWLYGPLA DVSRAYLTYA TYRLDVILRD TAIIGMVGGA GLGWQLMEAL SSFHWWLVLW IVLISALLTL LGESLGERLQ GSWNSRAMAL
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