Gene Syncc9605_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1174 
Symbol 
ID3736913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1102257 
End bp1103165 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID637775764 
Producthypothetical protein 
Protein accessionYP_381484 
Protein GI78212705 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0657223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CGCAGACCCC ACAACCCTGG TGGAACCGGG ACTCGGTGCG GGGAAGCCGT 
GCCCTAATCC TGAGTTCCCT GGCCTTCAGC CTGATGACGG TCTGCGTCAA GCAACTGAAC
AGTCGGGTTC CGGTGGCAGA AATCGTGCTG TGCCGGGCCC TGATCAGCAT CGTTCTGACC
GCTGTGGGCC TGCGCCTGGC CGGGGTCTAC CCATGGGGCC AGCGACGGGG GCTGCTGGTG
GTGCGGGGGG TGCTGGGCAG CTTGGCCCTG CTCTGCTTCT TCGAAGCGAT TGACCAGCTG
CCGCTCGCTT CAGCGACGGT GCTCCAGTAC ACCTACCCCA CCTTCACCGC CGTGGCAGCG
CTATTGCTGC TGGGCGAGCC CCTGCGCCGA CGCATCAGTG CAGCGGTTCT GCTGGGCTGG
ATCGGAGTCA CTCTGGTGGT GCAACCGCAG TGGCTCACGG GAACAGCGCA ACCTGAGCAA
CTGATCCCTG CGCTGATCGG CATTAGTGGC GCTCTGATGA CCGCCCTGGC CTACGTGAGT
GTGCGGCGTT TGTCGCAAAC CGAGCACTCC TTGGTAATCA TCCTCTATTT CCCGATGATC
TCGGTTCCCC TGACCCTGCC CTGGGTGCTG CAGCAAGGGG TCTGGCCCCA AGGCATCGAA
TGGTTCTGGC TCCTGGGGGT CGGGGTGATG ACCCAGCTGG GCCAGATCTG GGTGACCGAG
GGCCTGCGCT GCCTGCCCGC CGCCCGAGCC ACATCGATCA ACTACGTGCA GGTGGTCTTT
GCCGCTGGCT GGGGCTGGCT TTGGTTTGCT GAATCAATCA ATGCCTGGCA GGTGGGTGGC
GGGATGTTGG TACTGGCCGC CACCCTGATC AGCCTCTCAG CACGTGAAAA GAAATCAAGC
TTGAGGTAA
 
Protein sequence
MAEPQTPQPW WNRDSVRGSR ALILSSLAFS LMTVCVKQLN SRVPVAEIVL CRALISIVLT 
AVGLRLAGVY PWGQRRGLLV VRGVLGSLAL LCFFEAIDQL PLASATVLQY TYPTFTAVAA
LLLLGEPLRR RISAAVLLGW IGVTLVVQPQ WLTGTAQPEQ LIPALIGISG ALMTALAYVS
VRRLSQTEHS LVIILYFPMI SVPLTLPWVL QQGVWPQGIE WFWLLGVGVM TQLGQIWVTE
GLRCLPAARA TSINYVQVVF AAGWGWLWFA ESINAWQVGG GMLVLAATLI SLSAREKKSS
LR