| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1118 |
|---|
| Symbol | |
|---|
| ID | 3735671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1049678 |
|---|
| End bp | 1050790 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637775709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_381430 |
|---|
| Protein GI | 78212651 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0540786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.375546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA TCAAGCCTGC TTTTTGTCTT GCGGCTGTCA TCGCAGCGAC CTTGGCGATG
AGCGCCAATA CTTCTGGTTT TGCCAGCAGC AGGCCATCAG AGTGCGACGA CATCAAGCCT
GCTCTCAAAA AAGAAAGTTC AACGACGAAA GCCATCGTCA ATGCAGACAA CTACGCGTTT
GCTGAAACCG AAATAATTCT CGGTGATTAT GTTCAAAAAA TTGCCAAGGC AACCTGTTCA
GAAGGGATGG GCGTGTTCAT GCATTTCCGA AAGGCAATGG ATCCAAAAGA TAAAACTATA
TTGAGGCCAA ACTTCGATAC ATTGTACTCA GCAGCTGTTG TCGACTTAAA AAGTTCAGCA
ACAATTACCC TGCCACCTGC CGATCGGCTG CAAATCCTGG AAGTCGTTAG CGCTTATCAC
TGGATTCCAT TGGTAGCGAG CAAGCCCGGC GCCTACGAAA TAACAGAAGA AATGGTGGGC
AGCCGCTTCG CATTTGTCAT CATTCGCACC CAAGTAAACA TGCAGGATCC TGCTGACATT
GAGCGGGTTA GCGGGATTCA AGATGAAATA ACAATTCGCC AAAAGAATCG CGGCGAATTT
GTGCAAACCA AAGATTGGGA TAGAAGTAAA ATGCTTTCAA TGAGATCTGA CTACCAAAAA
GAAAAAGATG ATAAAGGCAT TAGCAGCGAA GAAATCTTTG GCGACAAGGG TGAAATCAGT
TCGGAGATGA GAAATATTGG GGTTGCCTTC GGGTGGGGGG CCCTGACAAA AGAAGGAGCC
GTCTATCCTT CAATTAGCAT TCCTGGATTT GATGAAGAAT TCACACTCGT ACTGAAGGAT
GTCCCTATGG CAAGCAATGC TTTCTGGTCG GTAACTGTCT ACGACAAGGA TGGATTCGCC
CAAGGAAAGA ATTACAATGT AAACAGCTCC TTTGCGAAGC AGGATAAAGA TGGCAACTAT
TTGCTTAATT TCGGAAAGAA TTCAGCCAAA GAAAATTTCT TAGAAATTTA CCCAGGCTCC
AACGCAACCC TACGCATCTA CTCTCCGCAA AAGCCTTATT TTGATGGAAG TTGGAAAGTT
CCCGAAATAC AATCTGCTGC CAGTAGTCAG TAA
|
|---|
| Protein sequence | MNQIKPAFCL AAVIAATLAM SANTSGFASS RPSECDDIKP ALKKESSTTK AIVNADNYAF
AETEIILGDY VQKIAKATCS EGMGVFMHFR KAMDPKDKTI LRPNFDTLYS AAVVDLKSSA
TITLPPADRL QILEVVSAYH WIPLVASKPG AYEITEEMVG SRFAFVIIRT QVNMQDPADI
ERVSGIQDEI TIRQKNRGEF VQTKDWDRSK MLSMRSDYQK EKDDKGISSE EIFGDKGEIS
SEMRNIGVAF GWGALTKEGA VYPSISIPGF DEEFTLVLKD VPMASNAFWS VTVYDKDGFA
QGKNYNVNSS FAKQDKDGNY LLNFGKNSAK ENFLEIYPGS NATLRIYSPQ KPYFDGSWKV
PEIQSAASSQ
|
|---|
| |