Gene Syncc9605_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0981 
Symbol 
ID3737618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp936984 
End bp937919 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID637775572 
Productcytochrome c oxidase subunit II 
Protein accessionYP_381294 
Protein GI78212515 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0740961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CAGCCCCCAA GAAAGGCCCC AACATCGGCT CCATTGTGGT CATCAGCATC 
GCGATCGCGA TCAATCTCGC CATCGCCAAA CTGATGGCGA CGTGGTCATA CAGCTGGTTT
CCGCCGCAGG CCTCCAGCGC AGCGGCCTAC GTCGACGATC TGTTCGCCCT GGAAACCGGC
ATCGGCTCCT TTATCTTCTT CGGCTGCACC GGCGTGATGG GCTGGGTGCT GCTGTTCAAC
CGGGCCGGTA AATACGACGA AAGCGACGGG GCACCAATTG AGGGCAACAC CAGATTGGAG
ATCATCTGGA CGGTGATCCC TCTGCTGCTG GTGTTCGCCA TTGCCTTCAC ATCGATGAAG
GTGAATGACA GCTTGAACGC CTTGGGGCCG AAGCAGAAGT ACGCCATCGG TGCCGACACC
AGCGCACTGC TCTCGGCCGA TCCCTTGGCG CAGGTGGGAC CGATCCAGGT GATTGCACGG
CAATGGAGCT GGGAATTCCG ATATCCCGAT GGCGTTCGCA GTTCAGAACT GCACCTCCCA
ATCGATCAAA GGGTCAACCT TCAGCTGCAA TCCGAGGACG TGATTCACAG CTTCTATGTG
CCGGCCTTTC GGCTGAAGCA GGACATCGTT CCCGGCAGCC TGATCTCCTA CAGCCTCACG
CCCACCCGGG AGGGGCGCTT CCGCCTGCGC GACGCCATGT TCAGTGGCGC CTACATGTCG
TTGAATCAAT CGAACGTGAT CGTCGAATCG GAGCAGGCCT ACTCCGATTG GCTGAAGCGT
TCGGCCAAGC AAGCCCTGCA ACCCGGCCTC GACCCCGGCC GCGTGCTCTA CGACCGTCGC
ATCGCCCGTG GTGACAAAGG CTGGGCCACG GTGCCACCGG CTCCTGCCCC GATGGTGAAC
GACCCCGGAG ATCCCTCCAT CCCGCACGAC GCCTGA
 
Protein sequence
MTSTAPKKGP NIGSIVVISI AIAINLAIAK LMATWSYSWF PPQASSAAAY VDDLFALETG 
IGSFIFFGCT GVMGWVLLFN RAGKYDESDG APIEGNTRLE IIWTVIPLLL VFAIAFTSMK
VNDSLNALGP KQKYAIGADT SALLSADPLA QVGPIQVIAR QWSWEFRYPD GVRSSELHLP
IDQRVNLQLQ SEDVIHSFYV PAFRLKQDIV PGSLISYSLT PTREGRFRLR DAMFSGAYMS
LNQSNVIVES EQAYSDWLKR SAKQALQPGL DPGRVLYDRR IARGDKGWAT VPPAPAPMVN
DPGDPSIPHD A