Gene Syncc9605_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0878 
Symbol 
ID3736251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp847481 
End bp849004 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content65% 
IMG OID637775478 
Producthypothetical protein 
Protein accessionYP_381201 
Protein GI78212422 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCCTC CCGCTGATTC CGATCACGTG CTGGTGGATG CCGCGTCCAT GGCGGCTGCG 
GAACAGAGGT TGTTCGAGAG CGGAATGCCC GTCGCCGCCT TGATGGAGAA GGTGGGGCTG
GCCATGGCGG CTTGGCTGCT GGCACGCCGG GATCTGCTGC GCCATGGCGT GGTTGTCCTG
GTGGGACCGG GTCACAACGG TGGCGATGGT CTGGTGGTGG CCCGGGAGTT GCACCTGGCT
GGCATCGAGG TGTCGTTGTG GTGTCCCCTG CCGATTCGCA AGACCCTCAC CGCTGAACAT
CTGCGCCACG GGGAGTGGCT TGGTCTGCGC CAACGGATTG AAGAGCCCAA TCCAGGCGGA
GCCGAACTGT GGCTGGATGC GGTCTTCGGG CTCGGCCAGA GTCGGCCGCT GCCAGAGCTC
TTGGCGGACC TCTTCCGGCG CCGCCAGCAT CTTCGGCCTG GAGCTTTGAT CAGCCTGGAT
GTGCCGTCGG GCCTTTGCTC CGACCAGGGA ACCGTGTTGG GCGAGCAGGC GGCCTGTGCC
TCGGTCACCC TCAGTGTTGG CTGGTTGAAG CGTGGGTTGT GTCTGGACCC GGCCCGTTCC
TGGGTTGGAG CATTGGTGCG GATTGATCTG GGGTTGCCCC CTGCGGTGAT GGGCAACGCC
GCAGCGGTCT TGCCGCGCCG TCTGCCGGTG ACAGAGGCCT GCTCGGCCCC GTTACCGCCG
CTGCCGCCCA CGGCGATGAA GTACGAGCGG GGCCGCTGCC TGGTGGTGGC GGGCAGTGAT
CGCTACCCCG GCGCAGCACA TCTGGCGCTG CGGGGTGCCA TGGCCAGTGG CTGCGGCTGC
GTTCAGGCCG TTGTGCCGCC CCGTCTTCAA TCCACCTTGT GGCAGGTGTT GCCGGAGGTG
ATGCAACTGG AGGACGGGGT GATTCCAGAG CGGCTGGATG CGGTTTTGGT CGGTCCCGGG
CTGGGGAAGC TCACCCATTG GTGGAGCCAG TGGTCGGAGC AGATGCTCAG CGTCTCCGGT
TTGCTGGTGC TCGATGCCGA TGGCCTCAAT GGCCTGGCGG CCAGTCCTCA GGGGTGGCGC
TGGTTGTTGA AGCGGCGGGG GGCGACATGG CTGACGCCTC ATGCGGCTGA GTTTTCCCGG
TTGTTTCCAG ATTGTGATGC GGGTGATGCG CTTGAGAAGG CGATCGCCGC GGCCCGCTGC
AGCCGTTGCT GCATTTTGCT AAAAGGTGCG CATTCCGTGC TAGCTGATCC AACGGGTGCG
GCGGTGGTGC TCACATCCAC GAGCCCCCAT GTGGCCCGCA CCGGCCTGGG TGATCTGCTG
GCCGGTTTTG CCACCGGTTG GGGCGCCCAG ACAGTTGCGT CACAGCAGCA GCCCGGGCTT
GAAAGCTTCG CTGCCGCTGC GTCTTTGCAC GGTTTGGCGG CCGCTCGTGC TCGCTCCAGT
GATGCTTCAA CGATTGCGGA TTGTTTGAAA ATCAATACAG CGCGGTGTCA GAAAAAGCAA
ACAACGATGT TCAACGAAGT CTGA
 
Protein sequence
MWPPADSDHV LVDAASMAAA EQRLFESGMP VAALMEKVGL AMAAWLLARR DLLRHGVVVL 
VGPGHNGGDG LVVARELHLA GIEVSLWCPL PIRKTLTAEH LRHGEWLGLR QRIEEPNPGG
AELWLDAVFG LGQSRPLPEL LADLFRRRQH LRPGALISLD VPSGLCSDQG TVLGEQAACA
SVTLSVGWLK RGLCLDPARS WVGALVRIDL GLPPAVMGNA AAVLPRRLPV TEACSAPLPP
LPPTAMKYER GRCLVVAGSD RYPGAAHLAL RGAMASGCGC VQAVVPPRLQ STLWQVLPEV
MQLEDGVIPE RLDAVLVGPG LGKLTHWWSQ WSEQMLSVSG LLVLDADGLN GLAASPQGWR
WLLKRRGATW LTPHAAEFSR LFPDCDAGDA LEKAIAAARC SRCCILLKGA HSVLADPTGA
AVVLTSTSPH VARTGLGDLL AGFATGWGAQ TVASQQQPGL ESFAAAASLH GLAAARARSS
DASTIADCLK INTARCQKKQ TTMFNEV